Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 95.39 | 95.39 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 92.63 | 92.63 |
| AT3G15060.1 | Thale cress | cytosol | 92.63 | 92.63 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 91.71 | 92.13 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 91.71 | 92.13 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 91.71 | 92.13 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 91.71 | 92.13 |
| Os05t0564400-02 | Rice | plasma membrane | 91.71 | 91.71 |
| KRH50137 | Soybean | cytosol, mitochondrion | 91.71 | 91.71 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 91.24 | 91.67 |
| OQU89311 | Sorghum | cytosol | 91.24 | 91.67 |
| Os09t0327100-01 | Rice | plasma membrane | 91.24 | 91.67 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 90.78 | 91.2 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 90.78 | 91.2 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 90.78 | 91.2 |
| EES19950 | Sorghum | cytosol | 90.78 | 91.2 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 90.32 | 90.74 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 90.32 | 90.74 |
| KRH30863 | Soybean | cytosol | 90.32 | 90.32 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 89.86 | 90.28 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 88.94 | 89.35 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 88.94 | 88.94 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 88.02 | 88.02 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 87.1 | 87.5 |
| AT1G28550.1 | Thale cress | cytosol | 87.1 | 86.7 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 86.18 | 86.57 |
| PGSC0003DMT400033395 | Potato | cytosol | 86.18 | 86.57 |
| AT2G33870.1 | Thale cress | cytosol | 86.64 | 86.24 |
| Solyc03g006270.2.1 | Tomato | cytosol | 85.71 | 86.11 |
| PGSC0003DMT400058784 | Potato | cytosol | 84.79 | 85.58 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 84.79 | 85.19 |
| Solyc10g008840.2.1 | Tomato | cytosol | 83.87 | 84.65 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 72.81 | 83.16 |
| AT4G18430.1 | Thale cress | cytosol | 82.95 | 82.95 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 75.58 | 82.0 |
| AT4G18800.1 | Thale cress | cytosol | 80.65 | 81.78 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 80.18 | 79.82 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 80.18 | 79.82 |
| AT5G45750.1 | Thale cress | cytosol | 78.8 | 79.17 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 70.05 | 79.17 |
| Zm00001d043935_P001 | Maize | cytosol | 78.34 | 77.27 |
| OQU87300 | Sorghum | cytosol | 77.88 | 77.17 |
| AT1G16920.1 | Thale cress | cytosol | 75.12 | 75.46 |
| AT1G06400.1 | Thale cress | cytosol | 73.73 | 74.07 |
| AT1G09630.1 | Thale cress | cytosol | 69.59 | 69.59 |
| AT1G07410.1 | Thale cress | cytosol | 67.74 | 68.69 |
| AT5G59150.1 | Thale cress | cytosol | 67.74 | 67.74 |
| AT3G46830.1 | Thale cress | cytosol | 67.28 | 67.28 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 69.12 | 59.29 |
| AT5G47960.1 | Thale cress | cytosol | 60.37 | 58.74 |
| AT3G12160.1 | Thale cress | cytosol | 59.45 | 58.11 |
| AT4G39990.1 | Thale cress | cytosol | 56.68 | 54.91 |
| AT5G65270.1 | Thale cress | cytosol | 55.76 | 53.54 |
| AT1G01200.1 | Thale cress | cytosol | 55.3 | 50.63 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 80.18 | 50.29 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:836207 | UniProt:A0A178U7P8 | ProteinID:AED97387.1 | EMBL:AK118670 |
| ArrayExpress:AT5G60860 | EnsemblPlantsGene:AT5G60860 | RefSeq:AT5G60860 | TAIR:AT5G60860 | RefSeq:AT5G60860-TAIR-G | EnsemblPlants:AT5G60860.1 |
| TAIR:AT5G60860.1 | Symbol:AtRABA1f | ProteinID:BAB10106.1 | EMBL:BT005238 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_200894.1 | ProteinID:OAO89655.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF649 | UniProt:Q9FJH0 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000000C59B |
Description
RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
Coordinates
chr5:+:24484498..24485705
Molecular Weight (calculated)
24277.7 Da
IEP (calculated)
5.735
GRAVY (calculated)
-0.253
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.