Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030105.1-P | Field mustard | cytosol | 97.71 | 97.71 |
| Bra032914.1-P | Field mustard | cytosol | 97.71 | 97.71 |
| CDX94631 | Canola | cytosol | 97.71 | 97.71 |
| CDY30818 | Canola | cytosol | 97.71 | 97.71 |
| CDY34094 | Canola | cytosol | 97.71 | 97.71 |
| CDY15659 | Canola | cytosol | 97.25 | 97.25 |
| CDY35757 | Canola | cytosol | 96.79 | 96.79 |
| Bra010860.1-P | Field mustard | cytosol | 95.41 | 96.74 |
| CDX90160 | Canola | cytosol | 95.41 | 96.74 |
| AT2G33870.1 | Thale cress | cytosol | 92.66 | 92.66 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 88.07 | 88.48 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 86.7 | 87.5 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 86.7 | 87.5 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 86.7 | 87.1 |
| KRH50137 | Soybean | cytosol, mitochondrion | 86.7 | 87.1 |
| AT5G60860.1 | Thale cress | cytosol | 86.7 | 87.1 |
| KRH30863 | Soybean | cytosol | 86.24 | 86.64 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 85.78 | 86.57 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 85.78 | 86.57 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 85.78 | 86.18 |
| OQU89311 | Sorghum | cytosol | 85.32 | 86.11 |
| Os09t0327100-01 | Rice | plasma membrane | 85.32 | 86.11 |
| AT3G15060.1 | Thale cress | cytosol | 85.32 | 85.71 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 84.4 | 85.19 |
| EES19950 | Sorghum | cytosol | 84.4 | 85.19 |
| Os05t0564400-02 | Rice | plasma membrane | 84.4 | 84.79 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 83.94 | 84.72 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 83.94 | 84.72 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 83.49 | 84.26 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 83.49 | 84.26 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 83.03 | 83.8 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 83.03 | 83.8 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 83.03 | 83.8 |
| Solyc10g008840.2.1 | Tomato | cytosol | 82.11 | 83.26 |
| PGSC0003DMT400058784 | Potato | cytosol | 82.11 | 83.26 |
| PGSC0003DMT400033395 | Potato | cytosol | 82.11 | 82.87 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 82.11 | 82.87 |
| Solyc03g006270.2.1 | Tomato | cytosol | 81.65 | 82.41 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 81.19 | 81.94 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 71.1 | 81.58 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 80.73 | 81.11 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 80.28 | 81.02 |
| AT4G18430.1 | Thale cress | cytosol | 78.44 | 78.8 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 72.02 | 78.5 |
| AT4G18800.1 | Thale cress | cytosol | 76.15 | 77.57 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 77.06 | 77.06 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 77.06 | 77.06 |
| AT5G45750.1 | Thale cress | cytosol | 74.31 | 75.0 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 65.6 | 74.48 |
| AT1G16920.1 | Thale cress | cytosol | 72.02 | 72.69 |
| OQU87300 | Sorghum | cytosol | 72.94 | 72.6 |
| Zm00001d043935_P001 | Maize | cytosol | 72.02 | 71.36 |
| AT1G06400.1 | Thale cress | cytosol | 68.81 | 69.44 |
| AT5G59150.1 | Thale cress | cytosol | 64.22 | 64.52 |
| AT1G09630.1 | Thale cress | cytosol | 64.22 | 64.52 |
| AT1G07410.1 | Thale cress | cytosol | 62.39 | 63.55 |
| AT3G46830.1 | Thale cress | cytosol | 62.39 | 62.67 |
| AT3G12160.1 | Thale cress | cytosol | 59.17 | 58.11 |
| AT5G47960.1 | Thale cress | cytosol | 58.72 | 57.4 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 64.22 | 55.34 |
| AT4G39990.1 | Thale cress | cytosol | 56.42 | 54.91 |
| AT5G65270.1 | Thale cress | cytosol | 56.42 | 54.42 |
| AT1G01200.1 | Thale cress | cytosol | 53.67 | 49.37 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 77.06 | 48.55 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:839755 | UniProt:A0A178WE67 | ProteinID:AAF16749.1 | ProteinID:AAF24551.2 |
| ProteinID:AEE30991.1 | ArrayExpress:AT1G28550 | EnsemblPlantsGene:AT1G28550 | RefSeq:AT1G28550 | TAIR:AT1G28550 | RefSeq:AT1G28550-TAIR-G |
| EnsemblPlants:AT1G28550.1 | TAIR:AT1G28550.1 | Symbol:AtRABA1i | EMBL:DQ056467 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0042546 | RefSeq:NP_174177.1 | ProteinID:OAP16710.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PO:PO:0000005 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007616 | PO:PO:0009046 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF649 | UniProt:Q9S810 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000009EFFB | : | : | : |
Description
RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
Coordinates
chr1:-:10036601..10037872
Molecular Weight (calculated)
24272.6 Da
IEP (calculated)
5.731
GRAVY (calculated)
-0.304
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.