Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55638 | Canola | cytosol | 96.77 | 96.77 |
| CDY01540 | Canola | cytosol | 96.77 | 96.77 |
| CDX76522 | Canola | cytosol | 96.31 | 96.31 |
| Bra012597.1-P | Field mustard | cytosol | 96.31 | 96.31 |
| Bra021009.1-P | Field mustard | cytosol | 95.85 | 95.85 |
| CDY60884 | Canola | cytosol | 86.18 | 83.86 |
| PGSC0003DMT400033395 | Potato | cytosol | 83.41 | 83.8 |
| Solyc03g006270.2.1 | Tomato | cytosol | 83.41 | 83.8 |
| AT5G60860.1 | Thale cress | cytosol | 82.95 | 82.95 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 82.49 | 82.49 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 82.49 | 82.49 |
| EES19950 | Sorghum | cytosol | 81.57 | 81.94 |
| KRH50137 | Soybean | cytosol, mitochondrion | 81.57 | 81.57 |
| AT3G15060.1 | Thale cress | cytosol | 81.57 | 81.57 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 81.11 | 81.48 |
| PGSC0003DMT400058784 | Potato | cytosol | 80.18 | 80.93 |
| KRH30863 | Soybean | cytosol | 80.65 | 80.65 |
| OQU89311 | Sorghum | cytosol | 80.18 | 80.56 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 80.18 | 80.56 |
| Os09t0327100-01 | Rice | plasma membrane | 80.18 | 80.56 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 80.18 | 80.56 |
| Solyc10g008840.2.1 | Tomato | cytosol | 79.72 | 80.47 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 79.72 | 80.09 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 79.72 | 80.09 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 79.72 | 80.09 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 79.72 | 80.09 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 79.72 | 80.09 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 79.72 | 79.72 |
| Os05t0564400-02 | Rice | plasma membrane | 79.72 | 79.72 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 79.72 | 79.72 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 79.26 | 79.63 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 79.26 | 79.63 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 79.26 | 79.63 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 79.26 | 79.63 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 79.26 | 79.63 |
| AT2G33870.1 | Thale cress | cytosol | 79.26 | 78.9 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 78.34 | 78.7 |
| AT1G28550.1 | Thale cress | cytosol | 78.8 | 78.44 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 77.88 | 78.24 |
| AT4G18800.1 | Thale cress | cytosol | 75.58 | 76.64 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 66.36 | 75.79 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 75.12 | 74.77 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 75.12 | 74.77 |
| AT5G45750.1 | Thale cress | cytosol | 74.19 | 74.54 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 68.66 | 74.5 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 63.59 | 71.88 |
| OQU87300 | Sorghum | cytosol | 71.89 | 71.23 |
| AT1G16920.1 | Thale cress | cytosol | 70.51 | 70.83 |
| Zm00001d043935_P001 | Maize | cytosol | 70.97 | 70.0 |
| AT1G06400.1 | Thale cress | cytosol | 69.59 | 69.91 |
| AT1G07410.1 | Thale cress | cytosol | 64.06 | 64.95 |
| AT3G46830.1 | Thale cress | cytosol | 64.06 | 64.06 |
| AT5G59150.1 | Thale cress | cytosol | 63.59 | 63.59 |
| AT1G09630.1 | Thale cress | cytosol | 63.59 | 63.59 |
| AT5G47960.1 | Thale cress | cytosol | 59.45 | 57.85 |
| AT3G12160.1 | Thale cress | cytosol | 58.99 | 57.66 |
| AT4G39990.1 | Thale cress | cytosol | 55.3 | 53.57 |
| AT5G65270.1 | Thale cress | cytosol | 55.3 | 53.1 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 61.29 | 52.57 |
| AT1G01200.1 | Thale cress | cytosol | 53.46 | 48.95 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 75.12 | 47.11 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:827574 | UniProt:A0A178V011 | ProteinID:AEE84045.1 | ArrayExpress:AT4G18430 |
| EnsemblPlantsGene:AT4G18430 | RefSeq:AT4G18430 | TAIR:AT4G18430 | RefSeq:AT4G18430-TAIR-G | EnsemblPlants:AT4G18430.1 | TAIR:AT4G18430.1 |
| Symbol:AtRABA1e | EMBL:BT010933 | EMBL:BT011645 | ProteinID:CAA16723.1 | ProteinID:CAB78845.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | RefSeq:NP_193578.1 | UniProt:O49513 | ProteinID:OAO99083.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF872 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A5C47 |
Description
RABA1ERas-related protein RABA1e [Source:UniProtKB/Swiss-Prot;Acc:O49513]
Coordinates
chr4:-:10183671..10185383
Molecular Weight (calculated)
24331.8 Da
IEP (calculated)
6.035
GRAVY (calculated)
-0.313
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAYRADDDY DYLFKLVLIG DSGVGKSNLL SRFTRNEFSI ESKSTIGVEF ATRSVHVDEK IIKAQLWDTA GQERYRAITS AYYRGAVGAL LVYDITRHIT
101: FENVERWLKE LRDHTDANVV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV LTQIYRVMSR KALDGTGDPM SLPKGQTIDI
201: GNKDDVTAVK SSGCCSG
101: FENVERWLKE LRDHTDANVV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV LTQIYRVMSR KALDGTGDPM SLPKGQTIDI
201: GNKDDVTAVK SSGCCSG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.