Factsheet for AT4G18800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99430	Canola	cytosol	95.79	95.79
CDY64916	Canola	cytosol	94.39	93.95
CDY62557	Canola	cytosol	94.39	93.95
AT5G45750.1	Thale cress	cytosol	91.12	90.28
Solyc02g072180.2.1	Tomato	cytosol	89.72	88.48
PGSC0003DMT400073077	Potato	cytosol	89.72	88.48
AT1G16920.1	Thale cress	cytosol	83.18	82.41
AT5G60860.1	Thale cress	cytosol	81.78	80.65
AT3G15060.1	Thale cress	cytosol	80.37	79.26
AT1G06400.1	Thale cress	cytosol	77.1	76.39
AT1G28550.1	Thale cress	cytosol	77.57	76.15
AT4G18430.1	Thale cress	cytosol	76.64	75.58
AT2G33870.1	Thale cress	cytosol	76.64	75.23
AT1G07410.1	Thale cress	cytosol	69.63	69.63
AT3G46830.1	Thale cress	cytosol	68.22	67.28
AT5G59150.1	Thale cress	cytosol	68.22	67.28
AT1G09630.1	Thale cress	cytosol	67.76	66.82
AT5G47960.1	Thale cress	cytosol	62.15	59.64
AT4G39990.1	Thale cress	cytosol	60.28	57.59
AT3G12160.1	Thale cress	cytosol	58.88	56.76
AT5G65270.1	Thale cress	cytosol	59.81	56.64
AT1G01200.1	Thale cress	cytosol	55.61	50.21

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:827614	UniProt:A0A178V3A0	ProteinID:AEE84091.1	EMBL:AK228509
ArrayExpress:AT4G18800	EnsemblPlantsGene:AT4G18800	RefSeq:AT4G18800	TAIR:AT4G18800	RefSeq:AT4G18800-TAIR-G	EnsemblPlants:AT4G18800.1
TAIR:AT4G18800.1	Symbol:ATHSGBP	Unigene:At.24230	EMBL:BT003901	EMBL:BT004936	ProteinID:CAB37465.1
ProteinID:CAB78882.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016787	GO:GO:0031901	GO:GO:0032588	GO:GO:0042546
RefSeq:NP_193615.1	ProteinID:OAO99834.1	InterPro:P-loop_NTPase	PFAM:PF00071	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF544	UniProt:Q9SN35	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000000C1D0

Description

RABA1DRABA1d [Source:UniProtKB/TrEMBL;Acc:A0A178V3A0]

Coordinates

chr4:-:10319862..10321573

Molecular Weight (calculated)

23871.0 Da

IEP (calculated)

4.994

GRAVY (calculated)

-0.343

Length

214 amino acids

Sequence
(BLAST)

001: MAGYRADDDY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSLNVNEK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.