Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020334.1-P | Field mustard | cytosol | 94.47 | 94.47 |
| CDY32661 | Canola | cytosol | 94.47 | 94.47 |
| CDY02867 | Canola | cytosol | 94.01 | 94.01 |
| CDY33014 | Canola | cytosol | 94.01 | 94.01 |
| Bra002589.1-P | Field mustard | cytosol | 93.55 | 93.55 |
| AT3G46830.1 | Thale cress | cytosol | 92.63 | 92.63 |
| KRH29738 | Soybean | endoplasmic reticulum | 88.02 | 88.43 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 87.56 | 87.96 |
| AT1G07410.1 | Thale cress | cytosol | 86.64 | 87.85 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 87.1 | 87.1 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 86.64 | 87.04 |
| PGSC0003DMT400053686 | Potato | cytosol | 86.64 | 87.04 |
| PGSC0003DMT400078200 | Potato | cytosol | 85.25 | 86.05 |
| Solyc06g076450.2.1 | Tomato | plastid | 84.79 | 85.58 |
| CDX80299 | Canola | cytosol | 94.47 | 79.46 |
| AT1G09630.1 | Thale cress | cytosol | 72.81 | 72.81 |
| AT1G16920.1 | Thale cress | cytosol | 69.12 | 69.44 |
| AT4G18800.1 | Thale cress | cytosol | 67.28 | 68.22 |
| AT5G60860.1 | Thale cress | cytosol | 67.74 | 67.74 |
| AT1G06400.1 | Thale cress | cytosol | 66.36 | 66.67 |
| AT3G15060.1 | Thale cress | cytosol | 66.36 | 66.36 |
| AT5G45750.1 | Thale cress | cytosol | 65.9 | 66.2 |
| AT2G33870.1 | Thale cress | cytosol | 65.44 | 65.14 |
| AT1G28550.1 | Thale cress | cytosol | 64.52 | 64.22 |
| AT4G18430.1 | Thale cress | cytosol | 63.59 | 63.59 |
| AT5G47960.1 | Thale cress | cytosol | 61.75 | 60.09 |
| AT3G12160.1 | Thale cress | cytosol | 60.83 | 59.46 |
| AT5G65270.1 | Thale cress | cytosol | 58.53 | 56.19 |
| AT4G39990.1 | Thale cress | cytosol | 56.22 | 54.46 |
| AT1G01200.1 | Thale cress | cytosol | 55.76 | 51.05 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:836033 | UniProt:A0A178U8X7 | ProteinID:AED97149.1 | EMBL:AF370127 |
| ArrayExpress:AT5G59150 | EnsemblPlantsGene:AT5G59150 | RefSeq:AT5G59150 | TAIR:AT5G59150 | RefSeq:AT5G59150-TAIR-G | EnsemblPlants:AT5G59150.1 |
| TAIR:AT5G59150.1 | Symbol:ATRABA2D | EMBL:AY040051 | ProteinID:BAB09761.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009504 | GO:GO:0009987 | GO:GO:0010008 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0042546 | RefSeq:NP_200723.1 | ProteinID:OAO90140.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | UniProt:Q9FIF9 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI00000AA690 | SEG:seg | : | : | : |
Description
RABA2DRas-related protein RABA2d [Source:UniProtKB/Swiss-Prot;Acc:Q9FIF9]
Coordinates
chr5:+:23876486..23878489
Molecular Weight (calculated)
23817.2 Da
IEP (calculated)
5.717
GRAVY (calculated)
-0.221
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHRVEQDYD YLFKIVLIGD SGVGKTNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKADLN HLRSVAEEDG QTLAETEGLS FLETSALEAT NVEKAFQTVL AEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVEDTSGAG KRGCCST
101: DNVLRWLREL RDHADSNIVI MMAGNKADLN HLRSVAEEDG QTLAETEGLS FLETSALEAT NVEKAFQTVL AEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVEDTSGAG KRGCCST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.