Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002589.1-P | Field mustard | cytosol | 99.54 | 99.54 |
| CDY32661 | Canola | cytosol | 94.47 | 94.47 |
| AT5G59150.1 | Thale cress | cytosol | 94.01 | 94.01 |
| CDY02867 | Canola | cytosol | 94.01 | 94.01 |
| KRH29738 | Soybean | endoplasmic reticulum | 87.56 | 87.96 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 87.56 | 87.96 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 87.1 | 87.5 |
| PGSC0003DMT400053686 | Potato | cytosol | 87.1 | 87.5 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 86.64 | 86.64 |
| CDY06703 | Canola | cytosol | 86.18 | 86.57 |
| CDY09919 | Canola | cytosol | 85.25 | 86.45 |
| CDY06256 | Canola | cytosol | 85.25 | 86.45 |
| Solyc06g076450.2.1 | Tomato | plastid | 84.33 | 85.12 |
| PGSC0003DMT400078200 | Potato | cytosol | 84.33 | 85.12 |
| CDY71720 | Canola | cytosol | 84.79 | 84.79 |
| CDX80299 | Canola | cytosol | 99.54 | 83.72 |
| CDX86101 | Canola | cytosol | 93.09 | 78.91 |
| CDY50888 | Canola | cytosol | 73.27 | 73.27 |
| CDX93495 | Canola | cytosol | 72.81 | 72.81 |
| CDX99094 | Canola | cytosol | 93.09 | 70.38 |
| CDY35128 | Canola | cytosol | 69.12 | 69.44 |
| CDX96799 | Canola | cytosol | 68.66 | 68.98 |
| CDY40023 | Canola | cytosol | 68.66 | 68.98 |
| CDX90160 | Canola | cytosol | 66.82 | 67.44 |
| CDX82451 | Canola | cytosol | 67.74 | 67.43 |
| CDX75804 | Canola | cytosol | 67.74 | 67.43 |
| CDY35757 | Canola | cytosol | 67.28 | 66.97 |
| CDY15659 | Canola | cytosol | 67.28 | 66.97 |
| CDX99430 | Canola | cytosol | 65.9 | 66.82 |
| CDX94631 | Canola | cytosol | 66.82 | 66.51 |
| CDY62557 | Canola | cytosol | 65.9 | 66.51 |
| CDY64916 | Canola | cytosol | 65.9 | 66.51 |
| CDY30818 | Canola | cytosol | 66.36 | 66.06 |
| CDY34094 | Canola | cytosol | 66.36 | 66.06 |
| CDY20100 | Canola | cytosol | 65.9 | 65.6 |
| CDY55638 | Canola | cytosol | 64.98 | 64.98 |
| CDY01540 | Canola | cytosol | 64.98 | 64.98 |
| CDX79548 | Canola | cytosol | 58.99 | 64.97 |
| CDX76522 | Canola | cytosol | 64.06 | 64.06 |
| CDX87774 | Canola | cytosol | 63.59 | 63.89 |
| CDY09976 | Canola | cytosol | 64.52 | 62.78 |
| CDY06210 | Canola | cytosol | 64.52 | 62.78 |
| CDX86332 | Canola | cytosol | 62.21 | 60.54 |
| CDX69843 | Canola | cytosol | 61.75 | 60.09 |
| CDY54519 | Canola | cytosol | 61.75 | 60.09 |
| CDX96994 | Canola | cytosol | 61.75 | 60.09 |
| CDY00758 | Canola | cytosol | 60.83 | 59.73 |
| CDX73833 | Canola | cytosol | 60.83 | 59.73 |
| CDY42133 | Canola | cytosol | 60.37 | 59.01 |
| CDY50568 | Canola | cytosol | 60.37 | 59.01 |
| CDY52622 | Canola | cytosol | 60.37 | 59.01 |
| CDY08447 | Canola | cytosol | 60.37 | 59.01 |
| CDY60884 | Canola | cytosol | 60.37 | 58.74 |
| CDY18682 | Canola | cytosol | 59.91 | 57.78 |
| CDY69836 | Canola | cytosol | 58.99 | 57.14 |
| CDX81274 | Canola | cytosol | 59.45 | 56.83 |
| CDX81790 | Canola | plastid | 68.2 | 55.43 |
| CDY15192 | Canola | cytosol | 52.07 | 47.68 |
| CDX90017 | Canola | cytosol | 52.07 | 47.68 |
| CDX69367 | Canola | cytosol | 40.09 | 47.28 |
| CDX69369 | Canola | cytosol | 58.53 | 31.13 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078H690 | UniProt:A0A078H690 | EnsemblPlants:CDY33014 | ProteinID:CDY33014 |
| ProteinID:CDY33014.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00053237001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0004EE896A | SEG:seg | : | : | : | : |
Description
BnaA10g12200DBnaA10g12200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H690]
Coordinates
chrLK032304:-:254659..256833
Molecular Weight (calculated)
23795.0 Da
IEP (calculated)
5.714
GRAVY (calculated)
-0.259
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHRVEQDYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNALRWLREL RDHADSNIVI MMAGNKSDLN HLRSVSEEDG RNLAEAEGLS FLETSALEAT NVEKAFQTVL TEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGAA KSGCCSS
101: DNALRWLREL RDHADSNIVI MMAGNKSDLN HLRSVSEEDG RNLAEAEGLS FLETSALEAT NVEKAFQTVL TEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGAA KSGCCSS
001: MAHRVEQDYD YLFKIVLIGD SGVGKTNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKADLN HLRSVAEEDG QTLAETEGLS FLETSALEAT NVEKAFQTVL AEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVEDTSGAG KRGCCST
101: DNVLRWLREL RDHADSNIVI MMAGNKADLN HLRSVAEEDG QTLAETEGLS FLETSALEAT NVEKAFQTVL AEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVEDTSGAG KRGCCST
Arabidopsis Description
RABA2DRas-related protein RABA2d [Source:UniProtKB/Swiss-Prot;Acc:Q9FIF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.