Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015578.1-P | Field mustard | cytosol | 99.54 | 99.54 |
| AT1G07410.1 | Thale cress | cytosol | 96.3 | 97.2 |
| CDY09919 | Canola | cytosol | 94.91 | 95.79 |
| CDY06256 | Canola | cytosol | 94.91 | 95.79 |
| CDY71720 | Canola | cytosol | 95.37 | 94.93 |
| KRH29738 | Soybean | endoplasmic reticulum | 86.57 | 86.57 |
| CDY33014 | Canola | cytosol | 86.57 | 86.18 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 86.11 | 86.11 |
| PGSC0003DMT400053686 | Potato | cytosol | 86.11 | 86.11 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 86.11 | 86.11 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 86.11 | 85.71 |
| CDY32661 | Canola | cytosol | 86.11 | 85.71 |
| CDY02867 | Canola | cytosol | 86.11 | 85.71 |
| Solyc06g076450.2.1 | Tomato | plastid | 84.26 | 84.65 |
| PGSC0003DMT400078200 | Potato | cytosol | 84.26 | 84.65 |
| CDY50888 | Canola | cytosol | 75.46 | 75.12 |
| CDX93495 | Canola | cytosol | 75.0 | 74.65 |
| CDX86101 | Canola | cytosol | 88.43 | 74.61 |
| CDX80299 | Canola | cytosol | 87.04 | 72.87 |
| CDX99430 | Canola | cytosol | 67.59 | 68.22 |
| CDY35128 | Canola | cytosol | 68.06 | 68.06 |
| CDY64916 | Canola | cytosol | 67.13 | 67.44 |
| CDY62557 | Canola | cytosol | 67.13 | 67.44 |
| CDX96799 | Canola | cytosol | 67.13 | 67.13 |
| CDY40023 | Canola | cytosol | 67.13 | 67.13 |
| CDX99094 | Canola | cytosol | 88.43 | 66.55 |
| CDX82451 | Canola | cytosol | 66.67 | 66.06 |
| CDY20100 | Canola | cytosol | 66.67 | 66.06 |
| CDX87774 | Canola | cytosol | 65.28 | 65.28 |
| CDX75804 | Canola | cytosol | 65.74 | 65.14 |
| CDX90160 | Canola | cytosol | 63.89 | 64.19 |
| CDY35757 | Canola | cytosol | 63.89 | 63.3 |
| CDY15659 | Canola | cytosol | 63.89 | 63.3 |
| CDX94631 | Canola | cytosol | 63.43 | 62.84 |
| CDY55638 | Canola | cytosol | 62.96 | 62.67 |
| CDX76522 | Canola | cytosol | 62.96 | 62.67 |
| CDY01540 | Canola | cytosol | 62.96 | 62.67 |
| CDX79548 | Canola | cytosol | 56.94 | 62.44 |
| CDY30818 | Canola | cytosol | 62.96 | 62.39 |
| CDY34094 | Canola | cytosol | 62.96 | 62.39 |
| CDY09976 | Canola | cytosol | 63.43 | 61.44 |
| CDY06210 | Canola | cytosol | 63.43 | 61.44 |
| CDX73833 | Canola | cytosol | 60.65 | 59.28 |
| CDY00758 | Canola | cytosol | 60.65 | 59.28 |
| CDX69843 | Canola | cytosol | 60.65 | 58.74 |
| CDX96994 | Canola | cytosol | 60.65 | 58.74 |
| CDY50568 | Canola | cytosol | 60.19 | 58.56 |
| CDY52622 | Canola | cytosol | 60.19 | 58.56 |
| CDX86332 | Canola | cytosol | 60.19 | 58.3 |
| CDY08447 | Canola | cytosol | 59.72 | 58.11 |
| CDY42133 | Canola | cytosol | 59.72 | 58.11 |
| CDY54519 | Canola | cytosol | 59.72 | 57.85 |
| CDY18682 | Canola | cytosol | 60.19 | 57.78 |
| CDX81274 | Canola | cytosol | 60.65 | 57.71 |
| CDY60884 | Canola | cytosol | 58.33 | 56.5 |
| CDY69836 | Canola | cytosol | 58.33 | 56.25 |
| CDX81790 | Canola | plastid | 67.13 | 54.31 |
| CDY15192 | Canola | cytosol | 51.39 | 46.84 |
| CDX90017 | Canola | cytosol | 51.39 | 46.84 |
| CDX69367 | Canola | cytosol | 38.89 | 45.65 |
| CDX69369 | Canola | cytosol | 56.94 | 30.15 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078F4S3 | EnsemblPlants:CDY06703 | ProteinID:CDY06703 | ProteinID:CDY06703.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00122883001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF4320 |
Description
BnaA10g04820D
Coordinates
chrLK031972:+:380150..381356
Molecular Weight (calculated)
23860.3 Da
IEP (calculated)
6.936
GRAVY (calculated)
-0.238
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAS NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LQVPGQGTAI
201: NITDSSVAKS KGCCST
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAS NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LQVPGQGTAI
201: NITDSSVAKS KGCCST
001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
Arabidopsis Description
RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.