CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021589.1-P	Field mustard	cytosol	100.0	100.0
AT3G15060.1	Thale cress	cytosol	90.83	91.24
CDX82451	Canola	cytosol	90.37	90.37
CDX75804	Canola	cytosol	89.45	89.45
KRH50137	Soybean	cytosol, mitochondrion	85.78	86.18
TraesCS7B01G200600.1	Wheat	cytosol	84.86	85.65
KRH20359	Soybean	cytosol, endoplasmic reticulum	84.86	85.25
VIT_10s0003g00550.t01	Wine grape	cytosol	84.86	85.25
TraesCS5A01G184100.1	Wheat	golgi, plastid	84.4	85.19
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	84.4	85.19
TraesCS7A01G285200.1	Wheat	cytosol	84.4	85.19
TraesCS7D01G289000.1	Wheat	cytosol	84.4	85.19
Os09t0327100-01	Rice	plasma membrane	83.94	84.72
TraesCS5D01G188900.1	Wheat	cytosol	83.94	84.72
TraesCS5B01G182200.1	Wheat	cytosol	83.94	84.72
EES19950	Sorghum	cytosol	83.94	84.72
OQU89311	Sorghum	cytosol	83.94	84.72
TraesCS1A01G398400.1	Wheat	cytosol	83.94	84.72
TraesCS1B01G426300.1	Wheat	cytosol	83.49	84.26
TraesCS1D01G405900.1	Wheat	cytosol	83.49	84.26
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	83.03	83.41
Os05t0564400-02	Rice	plasma membrane	83.03	83.41
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	82.57	83.33
KRH30863	Soybean	cytosol	82.57	82.95
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	82.11	82.87
CDX90160	Canola	cytosol	81.19	82.33
PGSC0003DMT400033395	Potato	cytosol	81.19	81.94
PGSC0003DMT400058784	Potato	cytosol	80.73	81.86
CDY30818	Canola	cytosol	81.65	81.65
CDY34094	Canola	cytosol	81.65	81.65
GSMUA_Achr5P09130_001	Banana	cytosol	81.19	81.57
Solyc03g006270.2.1	Tomato	cytosol	80.73	81.48
Solyc10g008840.2.1	Tomato	cytosol	80.28	81.4
CDY35757	Canola	cytosol	81.19	81.19
CDX94631	Canola	cytosol	80.73	80.73
CDX79548	Canola	cytosol	72.94	80.71
CDY15659	Canola	cytosol	80.28	80.28
GSMUA_Achr3P15540_001	Banana	cytosol	78.9	79.63
GSMUA_Achr1P11940_001	Banana	cytosol	77.98	78.7
GSMUA_Achr8P27180_001	Banana	cytosol	77.98	78.7
CDX76522	Canola	cytosol	77.98	78.34
CDX99430	Canola	cytosol	76.15	77.57
CDY01540	Canola	cytosol	77.06	77.42
CDY55638	Canola	cytosol	77.06	77.42
CDY64916	Canola	cytosol	76.15	77.21
CDY62557	Canola	cytosol	75.69	76.74
GSMUA_Achr4P02760_001	Banana	cytosol	66.51	76.32
TraesCS3A01G247000.1	Wheat	cytosol	75.23	75.23
TraesCS3D01G244500.1	Wheat	cytosol	75.23	75.23
GSMUA_Achr7P14790_001	Banana	cytosol	66.06	75.0
CDX96799	Canola	cytosol	72.94	73.61
CDY35128	Canola	cytosol	72.94	73.61
CDX87774	Canola	cytosol	72.48	73.15
CDY40023	Canola	cytosol	72.02	72.69
GSMUA_Achr1P04780_001	Banana	cytosol	66.51	72.5
Zm00001d043935_P001	Maize	cytosol	72.94	72.27
OQU87300	Sorghum	cytosol	72.02	71.69
CDY60884	Canola	cytosol	72.48	70.85
CDY50888	Canola	cytosol	68.35	68.66
CDY06210	Canola	cytosol	70.18	68.61
CDY09976	Canola	cytosol	70.18	68.61
CDX93495	Canola	cytosol	67.89	68.2
CDY06256	Canola	cytosol	65.6	66.82
CDY09919	Canola	cytosol	65.6	66.82
CDY06703	Canola	cytosol	66.06	66.67
CDY33014	Canola	cytosol	65.6	65.9
CDY71720	Canola	cytosol	65.14	65.44
CDY02867	Canola	cytosol	63.76	64.06
CDY32661	Canola	cytosol	63.76	64.06
CDX81790	Canola	plastid	72.94	59.55
CDX73833	Canola	cytosol	59.63	58.82
CDY00758	Canola	cytosol	59.63	58.82
GSMUA_Achr7P10970_001	Banana	cytosol	67.89	58.5
CDY50568	Canola	cytosol	59.17	58.11
CDY52622	Canola	cytosol	59.17	58.11
CDY08447	Canola	cytosol	58.72	57.66
CDY42133	Canola	cytosol	58.72	57.66
CDX96994	Canola	cytosol	58.72	57.4
CDX86332	Canola	cytosol	58.72	57.4
CDX69843	Canola	cytosol	58.26	56.95
CDY54519	Canola	cytosol	58.26	56.95
CDX80299	Canola	cytosol	66.06	55.81
CDY69836	Canola	cytosol	57.34	55.8
CDX86101	Canola	cytosol	65.14	55.47
CDY18682	Canola	cytosol	56.42	54.67
CDX81274	Canola	cytosol	56.42	54.19
CDX99094	Canola	cytosol	65.14	49.48
CDX90017	Canola	cytosol	53.67	49.37
CDY15192	Canola	cytosol	53.67	49.37
TraesCS3B01G272300.1	Wheat	cytosol	75.23	47.4
CDX69367	Canola	cytosol	38.99	46.2
CDX69369	Canola	cytosol	57.34	30.64

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078G0M6	UniProt:A0A078G0M6	EnsemblPlants:CDY20100	ProteinID:CDY20100
ProteinID:CDY20100.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00009953001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002544183

Description

BnaA01g29020DBnaA01g29020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0M6]

Coordinates

chrLK032103:+:150511..151486

Molecular Weight (calculated)

24264.6 Da

IEP (calculated)

5.391

GRAVY (calculated)

-0.256

Length

218 amino acids

Sequence
(BLAST)

001: MATYTADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRTIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAVSTED ATVFAEREKT FFMETSALEA LNVEDAFTQL LSQIYRVASK KALDVGDDDR SGVPKGQSVN
201: VGSKGDVSEV KKIGCCSS

Best Arabidopsis Sequence Match ( AT3G15060.1 )
(BLAST)

001: MAAYRADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDEK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTEANIV IMLVGNKADL RHLRAVSTED AKAFAERENT FFMETSALEA LNVENAFTEV LSQIYRVASK KALDIGDDHT TLPKGQSINV
201: GSKDDVSEVK KVGCCSS

Arabidopsis Description

RABA1GRas-related protein RABA1g [Source:UniProtKB/Swiss-Prot;Acc:Q9LK99]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.