Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037516.1-P | Field mustard | cytosol | 99.55 | 99.55 |
| CDY54519 | Canola | cytosol | 99.55 | 99.55 |
| AT5G47960.1 | Thale cress | cytosol | 94.62 | 94.62 |
| VIT_13s0064g01300.t01 | Wine grape | cytosol | 82.51 | 81.42 |
| Zm00001d005504_P001 | Maize | cytosol, extracellular | 81.61 | 80.53 |
| EER96479 | Sorghum | cytosol | 81.61 | 80.53 |
| CDY50568 | Canola | cytosol | 78.92 | 79.28 |
| CDY08447 | Canola | cytosol | 78.92 | 79.28 |
| CDY42133 | Canola | cytosol | 78.92 | 79.28 |
| CDY52622 | Canola | cytosol | 78.92 | 79.28 |
| GSMUA_Achr3P11810_001 | Banana | cytosol | 79.82 | 79.11 |
| CDX73833 | Canola | cytosol | 77.58 | 78.28 |
| CDY00758 | Canola | cytosol | 77.58 | 78.28 |
| GSMUA_Achr1P19620_001 | Banana | cytosol | 80.72 | 77.92 |
| TraesCS5D01G179100.1 | Wheat | cytosol | 78.92 | 77.88 |
| TraesCS5A01G176000.1 | Wheat | cytosol | 78.92 | 77.88 |
| TraesCS5B01G171900.1 | Wheat | cytosol | 78.48 | 77.43 |
| CDX69843 | Canola | cytosol | 68.61 | 68.61 |
| CDX96994 | Canola | cytosol | 68.61 | 68.61 |
| CDY18682 | Canola | cytosol | 68.16 | 67.56 |
| CDX81274 | Canola | cytosol | 68.16 | 66.96 |
| CDY69836 | Canola | cytosol | 66.82 | 66.52 |
| CDY32661 | Canola | cytosol | 62.78 | 64.52 |
| CDY02867 | Canola | cytosol | 62.78 | 64.52 |
| CDY33014 | Canola | cytosol | 60.54 | 62.21 |
| CDX96799 | Canola | cytosol | 59.64 | 61.57 |
| CDX90160 | Canola | cytosol | 59.19 | 61.4 |
| CDY06256 | Canola | cytosol | 58.3 | 60.75 |
| CDY09919 | Canola | cytosol | 58.3 | 60.75 |
| CDY35757 | Canola | cytosol | 59.19 | 60.55 |
| CDX99430 | Canola | cytosol | 57.85 | 60.28 |
| CDY06703 | Canola | cytosol | 58.3 | 60.19 |
| CDX87774 | Canola | cytosol | 58.3 | 60.19 |
| CDY35128 | Canola | cytosol | 58.3 | 60.19 |
| CDY15659 | Canola | cytosol | 58.74 | 60.09 |
| CDX94631 | Canola | cytosol | 58.74 | 60.09 |
| CDY30818 | Canola | cytosol | 58.74 | 60.09 |
| CDY34094 | Canola | cytosol | 58.74 | 60.09 |
| CDY50888 | Canola | cytosol | 58.3 | 59.91 |
| CDY71720 | Canola | cytosol | 58.3 | 59.91 |
| CDY55638 | Canola | cytosol | 57.85 | 59.45 |
| CDX93495 | Canola | cytosol | 57.85 | 59.45 |
| CDY01540 | Canola | cytosol | 57.85 | 59.45 |
| CDY40023 | Canola | cytosol | 57.4 | 59.26 |
| CDY62557 | Canola | cytosol | 56.95 | 59.07 |
| CDY64916 | Canola | cytosol | 56.95 | 59.07 |
| CDY20100 | Canola | cytosol | 57.4 | 58.72 |
| CDX82451 | Canola | cytosol | 57.4 | 58.72 |
| CDX76522 | Canola | cytosol | 56.95 | 58.53 |
| CDX75804 | Canola | cytosol | 56.95 | 58.26 |
| CDX79548 | Canola | cytosol | 50.67 | 57.36 |
| CDY15192 | Canola | cytosol | 60.09 | 56.54 |
| CDX90017 | Canola | cytosol | 60.09 | 56.54 |
| CDY09976 | Canola | cytosol | 56.05 | 56.05 |
| CDY06210 | Canola | cytosol | 56.05 | 56.05 |
| CDY60884 | Canola | cytosol | 54.26 | 54.26 |
| CDX69367 | Canola | cytosol | 43.95 | 53.26 |
| CDX80299 | Canola | cytosol | 60.54 | 52.33 |
| CDX86101 | Canola | cytosol | 58.74 | 51.17 |
| CDX81790 | Canola | plastid | 59.19 | 49.44 |
| CDX99094 | Canola | cytosol | 58.74 | 45.64 |
| CDX69369 | Canola | cytosol | 66.82 | 36.52 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078DB95 | EnsemblPlants:CDX86332 | ProteinID:CDX86332 | ProteinID:CDX86332.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00144454001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EEA17E |
Description
BnaA06g30490D
Coordinates
chrLK031845:-:969868..970843
Molecular Weight (calculated)
24696.4 Da
IEP (calculated)
6.290
GRAVY (calculated)
-0.252
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLHTNFNQ KIDYVFKVVL IGDSAVGKSQ LLARFSRNEF SIESKATIGV EFQTRTLTID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDITKR
101: QSFDHVARWL EELRGHADKN IVIMLVGNKT DLGTLRAVPT EDAKEFAQRE NLFFMETSAL DSINVEPSFL TVLTEIYRIV SKKNLVANEE GESGGDSSLL
201: QGTKIVVPGE EAEAKGKGCC GTS
101: QSFDHVARWL EELRGHADKN IVIMLVGNKT DLGTLRAVPT EDAKEFAQRE NLFFMETSAL DSINVEPSFL TVLTEIYRIV SKKNLVANEE GESGGDSSLL
201: QGTKIVVPGE EAEAKGKGCC GTS
001: MSKFQSNFNQ KIDYVFKVVL IGDSAVGKSQ LLARFSRNEF SIESKATIGV EFQTRTLEID RKTIKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDITKR
101: QSFDHVARWL EELRGHADKN IVIMLIGNKT DLGTLRAVPT EDAKEFAQRE NLFFMETSAL DSNNVEPSFL TVLTEIYRIV SKKNLVANEE GESGGDSSLL
201: QGTKIVVAGE ETESKGKGCC GTS
101: QSFDHVARWL EELRGHADKN IVIMLIGNKT DLGTLRAVPT EDAKEFAQRE NLFFMETSAL DSNNVEPSFL TVLTEIYRIV SKKNLVANEE GESGGDSSLL
201: QGTKIVVAGE ETESKGKGCC GTS
Arabidopsis Description
RABA4CSMG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.