Factsheet for GSMUA_Achr3P11810_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P19620_001	Banana	cytosol	88.89	86.58
GSMUA_Achr1P16540_001	Banana	cytosol	76.0	85.07
EER96479	Sorghum	cytosol	84.44	84.07
Zm00001d005504_P001	Maize	cytosol, extracellular	84.0	83.63
VIT_13s0064g01300.t01	Wine grape	cytosol	82.22	81.86
AT5G47960.1	Thale cress	cytosol	80.0	80.72
CDY54519	Canola	cytosol	79.56	80.27
TraesCS5B01G171900.1	Wheat	cytosol	80.44	80.09
Bra037516.1-P	Field mustard	cytosol	79.11	79.82
CDX86332	Canola	cytosol	79.11	79.82
TraesCS5D01G179100.1	Wheat	cytosol	80.0	79.65
TraesCS5A01G176000.1	Wheat	cytosol	80.0	79.65
GSMUA_Achr3P01690_001	Banana	cytosol	68.44	70.32
GSMUA_Achr3P21290_001	Banana	cytosol	68.0	69.86
GSMUA_Achr8P18090_001	Banana	cytosol	67.56	69.72
GSMUA_Achr3P15680_001	Banana	plasma membrane	62.22	64.52
GSMUA_Achr9P05610_001	Banana	cytosol	60.44	63.26
GSMUA_Achr4P02540_001	Banana	cytosol	53.78	63.02
GSMUA_Achr9P03770_001	Banana	cytosol	51.56	62.03
GSMUA_Achr5P09130_001	Banana	cytosol	59.56	61.75
GSMUA_Achr3P15540_001	Banana	cytosol	59.11	61.57
GSMUA_Achr1P11940_001	Banana	cytosol	58.67	61.11
GSMUA_Achr8P27780_001	Banana	cytosol	48.89	61.11
GSMUA_Achr4P02760_001	Banana	cytosol	51.56	61.05
GSMUA_Achr7P26890_001	Banana	cytosol	50.67	60.96
GSMUA_Achr5P28770_001	Banana	cytosol	58.67	60.83
GSMUA_Achr6P14930_001	Banana	cytosol	46.22	60.82
GSMUA_Achr8P27180_001	Banana	cytosol	57.78	60.19
GSMUA_Achr6P18430_001	Banana	cytosol	60.0	60.0
GSMUA_Achr6P28910_001	Banana	cytosol	57.78	59.91
GSMUA_Achr6P31790_001	Banana	cytosol	43.56	59.04
GSMUA_Achr2P05630_001	Banana	cytosol	56.0	58.6
GSMUA_Achr8P02230_001	Banana	plasma membrane	56.0	58.33
GSMUA_Achr3P13850_001	Banana	cytosol	60.44	58.12
GSMUA_Achr1P04780_001	Banana	cytosol	51.56	58.0
GSMUA_Achr9P00860_001	Banana	cytosol	58.22	56.96
GSMUA_Achr7P14790_001	Banana	cytosol	48.0	56.25
GSMUA_Achr7P10970_001	Banana	cytosol	50.22	44.66

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G11810_001	EnsemblPlants:GSMUA_Achr3P11810_001	EnsemblPlants:GSMUA_Achr3T11810_001
UniProt:M0SDU8	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF647	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000296F087	:

Description

Ras-related protein RGP1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G11810_001]

Coordinates

chr3:-:8753841..8757427

Molecular Weight (calculated)

24953.6 Da

IEP (calculated)

6.543

GRAVY (calculated)

-0.279

Length

225 amino acids

Sequence
(BLAST)

001: MSSGNSRYGE FNQRIDYVFK VVLIGDSAVG KSQLLARFAR NEFSVDSKAT IGVEFQTRTL NIDDKTIKAQ IWDTAGQERY RAVTSAYYRG AVGAMLVYDI
101: TKRQTFDHVA RWLDELRGHA DRNIVIMLIG NKSDLGSLRA VPIEDAKEFA QRENLFFMET SALEATNVEG AFVTVLTEIY RITSKKSLVA NDQSDSTGNS
201: SLLKGTQIVV PGQEPPSESK SMCCG

Best Arabidopsis Sequence Match ( AT5G47960.1 )
(BLAST)

001: MSKFQSNFNQ KIDYVFKVVL IGDSAVGKSQ LLARFSRNEF SIESKATIGV EFQTRTLEID RKTIKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDITKR
101: QSFDHVARWL EELRGHADKN IVIMLIGNKT DLGTLRAVPT EDAKEFAQRE NLFFMETSAL DSNNVEPSFL TVLTEIYRIV SKKNLVANEE GESGGDSSLL
201: QGTKIVVAGE ETESKGKGCC GTS

Arabidopsis Description

RABA4CSMG1 [Source:UniProtKB/TrEMBL;Acc:A0A178UQI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.