Factsheet for TraesCS5D01G179100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G176000.1	Wheat	cytosol	100.0	100.0
TraesCS5B01G171900.1	Wheat	cytosol	99.11	99.11
EER96479	Sorghum	cytosol	86.73	86.73
Zm00001d005504_P001	Maize	cytosol, extracellular	85.84	85.84
VIT_13s0064g01300.t01	Wine grape	cytosol	82.74	82.74
GSMUA_Achr3P11810_001	Banana	cytosol	79.65	80.0
Bra037516.1-P	Field mustard	cytosol	77.88	78.92
CDX86332	Canola	cytosol	77.88	78.92
CDY54519	Canola	cytosol	77.43	78.48
AT5G47960.1	Thale cress	cytosol	76.99	78.03
GSMUA_Achr1P19620_001	Banana	cytosol	79.65	77.92
TraesCS1D01G136900.1	Wheat	cytosol	70.8	74.07
TraesCS3D01G357500.1	Wheat	cytosol	58.85	61.29
TraesCS7D01G368300.1	Wheat	cytosol	58.41	60.83
TraesCS5D01G188900.1	Wheat	cytosol	57.52	60.19
TraesCS1D01G405900.1	Wheat	cytosol	57.52	60.19
TraesCS3D01G244500.1	Wheat	cytosol	57.08	59.17
TraesCS7D01G289000.1	Wheat	cytosol	56.19	58.8
TraesCS5D01G529500.1	Wheat	cytosol	57.96	58.22
TraesCS3D01G289400.1	Wheat	cytosol	56.19	57.47
TraesCS5D01G498600.1	Wheat	cytosol	54.42	57.21
TraesCS1D01G133200.1	Wheat	cytosol, plastid	54.87	57.14
TraesCS7D01G381500.1	Wheat	cytosol	55.31	55.8
TraesCS1D01G013300.1	Wheat	cytosol	54.87	55.61
TraesCS5D01G321800.1	Wheat	cytosol	54.42	50.2

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF647	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS5D01G179100
EnsemblPlants:TraesCS5D01G179100.1	TIGR:cd01868	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:278310561..278312301

Molecular Weight (calculated)

24883.8 Da

IEP (calculated)

8.179

GRAVY (calculated)

-0.295

Length

226 amino acids

Sequence
(BLAST)

001: MSRGGGYGEM GQKIDYVFKV VLIGDSAVGK SQLLARFARN EFSLDSKATI GVEFQTKTLQ IDNRTVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDMT
101: KRQSFDHMAR WLEELRSHAD KNIVIMLIGN KSDLGTLRAV PTEDAKEFAE RESLFFMETS ALEATNVEKA FMTGLEEIYR TVSKKNLVAN DEANSGGNSS
201: LLKGTKVIIP GQEPAPPAKA ACCMSS

Best Arabidopsis Sequence Match ( AT3G12160.1 )
(BLAST)

001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS

Arabidopsis Description

RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.