Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G324300.1 | Wheat | cytosol, golgi | 99.55 | 99.55 |
| TraesCS3A01G289600.1 | Wheat | cytosol | 99.09 | 99.09 |
| EES19812 | Sorghum | cytosol | 85.07 | 85.45 |
| GSMUA_Achr4P02540_001 | Banana | cytosol | 73.3 | 84.38 |
| GSMUA_Achr3P15680_001 | Banana | plasma membrane | 82.81 | 84.33 |
| GSMUA_Achr9P05610_001 | Banana | cytosol | 81.9 | 84.19 |
| AT1G16920.1 | Thale cress | cytosol | 81.0 | 82.87 |
| GSMUA_Achr8P27780_001 | Banana | cytosol | 67.42 | 82.78 |
| CDY35128 | Canola | cytosol | 80.54 | 82.41 |
| Bra026016.1-P | Field mustard | cytosol | 80.09 | 81.94 |
| KRH27364 | Soybean | endoplasmic reticulum | 80.09 | 81.57 |
| CDY40023 | Canola | cytosol | 79.64 | 81.48 |
| CDX96799 | Canola | cytosol | 79.64 | 81.48 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 79.64 | 81.11 |
| TraesCS7D01G368300.1 | Wheat | cytosol | 79.64 | 81.11 |
| GSMUA_Achr6P31790_001 | Banana | cytosol | 60.63 | 80.72 |
| HORVU3Hr1G071740.1 | Barley | plastid | 99.09 | 76.57 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 74.66 | 76.39 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 72.85 | 74.54 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 71.49 | 73.15 |
| VIT_19s0014g01160.t01 | Wine grape | extracellular | 82.35 | 72.22 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 66.52 | 67.43 |
| TraesCS3D01G357500.1 | Wheat | cytosol | 65.16 | 66.36 |
| TraesCS5D01G498600.1 | Wheat | cytosol | 64.25 | 66.05 |
| CDX81790 | Canola | plastid | 78.73 | 65.17 |
| TraesCS5D01G529500.1 | Wheat | cytosol | 66.06 | 64.89 |
| TraesCS1D01G013300.1 | Wheat | cytosol | 63.35 | 62.78 |
| TraesCS1D01G133200.1 | Wheat | cytosol, plastid | 61.09 | 62.21 |
| TraesCS1D01G136900.1 | Wheat | cytosol | 57.92 | 59.26 |
| TraesCS5D01G179100.1 | Wheat | cytosol | 57.47 | 56.19 |
| TraesCS7D01G381500.1 | Wheat | cytosol | 52.04 | 51.34 |
| TraesCS5D01G321800.1 | Wheat | cytosol | 51.13 | 46.12 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0042538 | GO:GO:0060627 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS3D01G289400 | EnsemblPlants:TraesCS3D01G289400.1 | TIGR:cd01868 | : |
Description
No Description!
Coordinates
chr3D:+:399370549..399376970
Molecular Weight (calculated)
24034.0 Da
IEP (calculated)
4.836
GRAVY (calculated)
-0.293
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGGGAYR AEDDYDYLFK AVIIGDSGVG KSNLLSRFTK NEFCLESKST IGVEFATRSL QVDGKVVKAQ IWDTAGQERY RAITSAYYRG AVGALLVYDV
101: TRRATFDNVA RWLKELRDHT DSSIVVMLVG NKSDLRHLVA VSTEDGQEYA EAESLYFMET SALDATNVDN AFSEVLTQIY RIASRKTVDA GDDGSSAPSK
201: GENINVKDDV SSLKKAGCCS S
101: TRRATFDNVA RWLKELRDHT DSSIVVMLVG NKSDLRHLVA VSTEDGQEYA EAESLYFMET SALDATNVDN AFSEVLTQIY RIASRKTVDA GDDGSSAPSK
201: GENINVKDDV SSLKKAGCCS S
001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
Arabidopsis Description
RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.