Factsheet for TraesCS7D01G381500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G297900.1
TraesCS1B01G307400.1
TraesCS1D01G293300.1
TraesCS3A01G348100.1
TraesCS3B01G380000.1
TraesCS3D01G341700.1
TraesCS4A01G180500.1
TraesCS4B01G137300.1
TraesCS4D01G132000.1
TraesCS5A01G151600.1
TraesCS5B01G150200.1
TraesCS5D01G156800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01200.1	TraesCS1A01G297900.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS1B01G307400.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS1D01G293300.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3A01G348100.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3B01G380000.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3D01G341700.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4A01G180500.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4B01G137300.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4D01G132000.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5A01G151600.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5B01G150200.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5D01G156800.1	AT2G38360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G287900.1	Wheat	cytosol	96.43	96.43
HORVU7Hr1G091490.3	Barley	cytosol	86.61	85.09
EER90389	Sorghum	cytosol	69.64	74.64
Os06t0714600-01	Rice	cytosol	74.55	74.22
GSMUA_Achr9P00860_001	Banana	cytosol	68.75	66.96
GSMUA_Achr3P13850_001	Banana	cytosol	65.62	62.82
TraesCS5D01G321800.1	Wheat	cytosol	67.41	61.63
KRH06418	Soybean	cytosol	65.18	59.84
KRH47850	Soybean	cytosol	65.18	59.59
VIT_15s0048g03000.t01	Wine grape	cytosol	62.95	59.0
KRH68938	Soybean	cytosol	62.05	58.9
AT1G01200.1	Thale cress	cytosol	62.05	58.65
PGSC0003DMT400000356	Potato	cytosol	62.95	58.51
KRG97215	Soybean	cytosol	61.61	58.47
TraesCS1D01G136900.1	Wheat	cytosol	55.36	57.41
CDY15192	Canola	cytosol	60.71	57.38
Solyc01g096220.2.1	Tomato	plastid	62.05	57.2
Bra033277.1-P	Field mustard	cytosol	60.27	56.96
CDX90017	Canola	cytosol	60.27	56.96
TraesCS5D01G179100.1	Wheat	cytosol	55.8	55.31
TraesCS3D01G357500.1	Wheat	cytosol	53.57	55.3
TraesCS7D01G368300.1	Wheat	cytosol	52.23	53.92
TraesCS1D01G405900.1	Wheat	cytosol	51.79	53.7
TraesCS3D01G244500.1	Wheat	cytosol	52.23	53.67
TraesCS5D01G498600.1	Wheat	cytosol	51.34	53.49
TraesCS5D01G188900.1	Wheat	cytosol	50.89	52.78
TraesCS7D01G289000.1	Wheat	cytosol	50.89	52.78
TraesCS3D01G289400.1	Wheat	cytosol	51.34	52.04
TraesCS1D01G013300.1	Wheat	cytosol	50.89	51.12
TraesCS5D01G529500.1	Wheat	cytosol	50.89	50.67
TraesCS1D01G133200.1	Wheat	cytosol, plastid	48.21	49.77

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF345	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS7D01G381500
EnsemblPlants:TraesCS7D01G381500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:495703878..495704552

Molecular Weight (calculated)

24185.5 Da

IEP (calculated)

4.870

GRAVY (calculated)

-0.148

Length

224 amino acids

Sequence
(BLAST)

001: MEEDYVFKVV VIGDSGVGKT QLLGRFTRGD FCLDSKSTIG IEFQTRTVDI AGRRVKAQIW DTAGQERYRA VTSAYYRGAL GAMLVYDVTR RDSFSHAARW
101: VAELRAHADK SIVVALVGNK ADLTAAAPGR REVGAEEAEA FAEEQGLFFY DASALSGDNV EAAFLGLLEE IHAAVSRKPL EAARGNGDGD DDVLVLKGIS
201: LSQELSMMET SAMKTPSRCS SCSS

Best Arabidopsis Sequence Match ( AT1G01200.1 )
(BLAST)

001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC

Arabidopsis Description

RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.