Factsheet for Os06t0714600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0827400-01
Os05t0474400-01
Os11t0107600-01
Os12t0107600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01200.1	Os01t0827400-01	AT2G38360.1	21798944
AT1G01200.1	Os05t0474400-01	AT2G38360.1	21798944
AT1G01200.1	Os11t0107600-01	AT2G38360.1	21798944
AT1G01200.1	Os12t0107600-00	AT2G38360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G287900.1	Wheat	cytosol	75.11	75.45
TraesCS7D01G381500.1	Wheat	cytosol	74.22	74.55
EER90389	Sorghum	cytosol	68.89	74.16
Os09t0527600-01	Rice	cytosol, plasma membrane	71.11	66.95
HORVU7Hr1G091490.3	Barley	cytosol	67.56	66.67
GSMUA_Achr9P00860_001	Banana	cytosol	68.0	66.52
GSMUA_Achr3P13850_001	Banana	cytosol	67.56	64.96
KRH68938	Soybean	cytosol	63.56	60.59
KRG97215	Soybean	cytosol	63.11	60.17
AT1G01200.1	Thale cress	cytosol	63.11	59.92
KRH47850	Soybean	cytosol	64.44	59.18
PGSC0003DMT400000356	Potato	cytosol	63.11	58.92
KRH06418	Soybean	cytosol	63.56	58.61
VIT_15s0048g03000.t01	Wine grape	cytosol	62.22	58.58
Solyc01g096220.2.1	Tomato	plastid	63.11	58.44
Os10t0377400-01	Rice	cytosol	55.56	57.87
Bra033277.1-P	Field mustard	cytosol	60.44	57.38
CDY15192	Canola	cytosol	60.44	57.38
CDX90017	Canola	cytosol	60.44	57.38
Os06t0551400-01	Rice	cytosol, golgi, plasma membrane, plastid	52.44	54.38
Os01t0848700-01	Rice	cytosol, plasma membrane	51.56	53.7
Os09t0327100-01	Rice	plasma membrane	50.67	52.78
Os03t0843100-01	Rice	cytosol	51.56	52.02
Os05t0564400-02	Rice	plasma membrane	49.78	51.61
Os05t0105100-01	Rice	golgi, plasma membrane	50.22	51.36
Os03t0823700-01	Rice	plasma membrane	48.89	51.16

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:4342063	ProteinID:BAD53566.1	ProteinID:BAF20490.1	ProteinID:BAS99484.1
ProteinID:EAZ38274.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0016787	EnsemblPlantsGene:Os06g0714600	EnsemblPlants:Os06t0714600-01	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF345	UniProt:Q5Z9Q7	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0000446DB5	RefSeq:XP_015642685.1	RefSeq:XP_015642686.1	RefSeq:XP_015642687.1
SEG:seg	:	:	:	:	:

Description

OsPRA2Small G protein, Negative regulation of brassinosteroid signaling (Os06t0714600-01)

Coordinates

chr6:-:30336056..30337006

Molecular Weight (calculated)

24611.2 Da

IEP (calculated)

5.960

GRAVY (calculated)

-0.060

Length

225 amino acids

Sequence
(BLAST)

001: MEEEDYVFKV VVIGDSAVGK TQLLGRFTKD EFFIDSKSTI GIEFQTRTVE IGGKRVKAQI WDTAGQERYR AVTSAYYRGA LGAMLVYDVT SRRSFHHAAR
101: WLHDLRAHAD NSIVVMLIGN KADLSHARAV AADEAAAFAE DQGLFFSEAS ALSGDNVEEA FLGLLREIHA IVSRRSLLEM DGINGDAAAN ANAALMLRGT
201: KLSLSDELSI METSAIKRVS RCSCS

Best Arabidopsis Sequence Match ( AT1G01200.1 )
(BLAST)

001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC

Arabidopsis Description

RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.