Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90017 | Canola | cytosol | 89.45 | 89.45 |
| Bra033277.1-P | Field mustard | cytosol | 89.45 | 89.45 |
| CDY15192 | Canola | cytosol | 88.61 | 88.61 |
| VIT_15s0048g03000.t01 | Wine grape | cytosol | 71.31 | 70.71 |
| Solyc01g096220.2.1 | Tomato | plastid | 71.73 | 69.96 |
| KRH68938 | Soybean | cytosol | 68.78 | 69.07 |
| KRH47850 | Soybean | cytosol | 71.31 | 68.98 |
| KRH06418 | Soybean | cytosol | 70.89 | 68.85 |
| KRG97215 | Soybean | cytosol | 68.35 | 68.64 |
| PGSC0003DMT400000356 | Potato | cytosol | 69.2 | 68.05 |
| GSMUA_Achr9P00860_001 | Banana | cytosol | 65.4 | 67.39 |
| Os09t0527600-01 | Rice | cytosol, plasma membrane | 63.71 | 63.18 |
| Os06t0714600-01 | Rice | cytosol | 59.92 | 63.11 |
| TraesCS7B01G287900.1 | Wheat | cytosol | 59.49 | 62.95 |
| HORVU5Hr1G080990.3 | Barley | cytosol, plasma membrane, vacuole | 58.23 | 62.44 |
| GSMUA_Achr3P13850_001 | Banana | cytosol | 61.6 | 62.39 |
| TraesCS7D01G381500.1 | Wheat | cytosol | 58.65 | 62.05 |
| AT5G47960.1 | Thale cress | cytosol | 56.54 | 60.09 |
| TraesCS5D01G321800.1 | Wheat | cytosol | 61.6 | 59.59 |
| TraesCS5A01G315700.1 | Wheat | cytosol | 62.03 | 59.51 |
| AT3G12160.1 | Thale cress | cytosol | 55.7 | 59.46 |
| TraesCS5B01G316300.1 | Wheat | cytosol | 61.6 | 58.87 |
| EER90389 | Sorghum | cytosol | 51.9 | 58.85 |
| EER97073 | Sorghum | cytosol | 62.87 | 58.2 |
| AT4G39990.1 | Thale cress | cytosol | 54.85 | 58.04 |
| Zm00001d021246_P002 | Maize | cytosol | 60.34 | 57.66 |
| HORVU7Hr1G091490.3 | Barley | cytosol | 55.27 | 57.46 |
| AT5G65270.1 | Thale cress | cytosol | 54.43 | 57.08 |
| AT5G59150.1 | Thale cress | cytosol | 51.05 | 55.76 |
| AT1G09630.1 | Thale cress | cytosol | 51.05 | 55.76 |
| AT4G18800.1 | Thale cress | cytosol | 50.21 | 55.61 |
| AT5G60860.1 | Thale cress | cytosol | 50.63 | 55.3 |
| AT1G16920.1 | Thale cress | cytosol | 49.37 | 54.17 |
| AT3G46830.1 | Thale cress | cytosol | 49.37 | 53.92 |
| AT3G15060.1 | Thale cress | cytosol | 49.37 | 53.92 |
| AT5G45750.1 | Thale cress | cytosol | 48.95 | 53.7 |
| AT1G28550.1 | Thale cress | cytosol | 49.37 | 53.67 |
| AT4G18430.1 | Thale cress | cytosol | 48.95 | 53.46 |
| AT1G07410.1 | Thale cress | cytosol | 47.68 | 52.8 |
| AT2G33870.1 | Thale cress | cytosol | 48.52 | 52.75 |
| AT1G06400.1 | Thale cress | cytosol | 47.26 | 51.85 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:839493 | UniProt:A0A178W3F7 | ProteinID:AAF97325.1 | ProteinID:AEE27253.1 |
| ArrayExpress:AT1G01200 | EnsemblPlantsGene:AT1G01200 | RefSeq:AT1G01200 | TAIR:AT1G01200 | RefSeq:AT1G01200-TAIR-G | EnsemblPlants:AT1G01200.1 |
| TAIR:AT1G01200.1 | Symbol:ATRABA3 | EMBL:BT010707 | EMBL:BT010979 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009504 | GO:GO:0009987 | GO:GO:0010008 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0042546 | RefSeq:NP_171628.2 | ProteinID:OAP13059.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PO:PO:0000293 | PO:PO:0005679 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009046 | PO:PO:0020100 |
| PO:PO:0020131 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF345 | UniProt:Q9LNK1 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000009D9B8 | : | : | : |
Description
RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
Coordinates
chr1:-:86486..88409
Molecular Weight (calculated)
26251.1 Da
IEP (calculated)
5.436
GRAVY (calculated)
-0.251
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.