Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18682 | Canola | cytosol | 94.69 | 95.11 |
| Bra037810.1-P | Field mustard | cytosol | 94.69 | 95.11 |
| CDX81274 | Canola | cytosol | 94.25 | 93.83 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 83.63 | 82.53 |
| Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 76.99 | 80.18 |
| AT4G39990.1 | Thale cress | cytosol | 79.2 | 79.91 |
| OQU91938 | Sorghum | cytosol | 76.55 | 79.72 |
| GSMUA_Achr3P01690_001 | Banana | cytosol | 76.99 | 79.45 |
| Os10t0377400-01 | Rice | cytosol | 75.66 | 79.17 |
| GSMUA_Achr3P21290_001 | Banana | cytosol | 76.55 | 79.0 |
| TraesCS1D01G136900.1 | Wheat | cytosol | 75.22 | 78.7 |
| TraesCS1B01G152100.1 | Wheat | cytosol | 75.22 | 78.7 |
| TraesCS1A01G131500.2 | Wheat | cytosol | 75.22 | 78.7 |
| EER92725 | Sorghum | cytosol | 75.22 | 78.34 |
| GSMUA_Achr8P18090_001 | Banana | cytosol | 75.22 | 77.98 |
| Zm00001d048222_P001 | Maize | extracellular, plasma membrane | 74.78 | 77.88 |
| Zm00001d028002_P001 | Maize | mitochondrion | 74.34 | 77.42 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 80.09 | 76.37 |
| AT3G12160.1 | Thale cress | cytosol | 69.47 | 70.72 |
| AT5G47960.1 | Thale cress | cytosol | 67.26 | 68.16 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 74.34 | 61.54 |
| AT3G46830.1 | Thale cress | cytosol | 57.52 | 59.91 |
| AT4G18800.1 | Thale cress | cytosol | 56.64 | 59.81 |
| AT1G07410.1 | Thale cress | cytosol | 56.64 | 59.81 |
| AT5G45750.1 | Thale cress | cytosol | 57.08 | 59.72 |
| AT1G16920.1 | Thale cress | cytosol | 56.19 | 58.8 |
| AT5G59150.1 | Thale cress | cytosol | 56.19 | 58.53 |
| AT1G09630.1 | Thale cress | cytosol | 55.31 | 57.6 |
| AT1G28550.1 | Thale cress | cytosol | 54.42 | 56.42 |
| AT3G15060.1 | Thale cress | cytosol | 53.54 | 55.76 |
| AT5G60860.1 | Thale cress | cytosol | 53.54 | 55.76 |
| AT1G06400.1 | Thale cress | cytosol | 53.1 | 55.56 |
| AT4G18430.1 | Thale cress | cytosol | 53.1 | 55.3 |
| AT2G33870.1 | Thale cress | cytosol | 53.1 | 55.05 |
| AT1G01200.1 | Thale cress | cytosol | 57.08 | 54.43 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:836652 | UniProt:A0A178UKD0 | ProteinID:AED98031.1 | ArrayExpress:AT5G65270 |
| EnsemblPlantsGene:AT5G65270 | RefSeq:AT5G65270 | TAIR:AT5G65270 | RefSeq:AT5G65270-TAIR-G | EnsemblPlants:AT5G65270.1 | TAIR:AT5G65270.1 |
| EMBL:AY045947 | EMBL:AY079309 | EMBL:AY087004 | Symbol:AtRABA4a | ProteinID:BAB11663.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0042546 | RefSeq:NP_201330.1 | ProteinID:OAO93990.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0005679 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | UniProt:Q9FJN8 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 |
| InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00000A2DAA | : | : |
Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
Coordinates
chr5:+:26083216..26084832
Molecular Weight (calculated)
24843.4 Da
IEP (calculated)
5.781
GRAVY (calculated)
-0.259
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.