Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G152100.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS1A01G131500.2 | Wheat | cytosol | 100.0 | 100.0 |
| Os10t0377400-01 | Rice | cytosol | 95.83 | 95.83 |
| Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 94.91 | 94.47 |
| OQU91938 | Sorghum | cytosol | 94.44 | 94.01 |
| GSMUA_Achr3P01690_001 | Banana | cytosol | 83.8 | 82.65 |
| GSMUA_Achr8P18090_001 | Banana | cytosol | 83.33 | 82.57 |
| GSMUA_Achr3P21290_001 | Banana | cytosol | 81.94 | 80.82 |
| PGSC0003DMT400041813 | Potato | cytosol | 82.87 | 79.91 |
| Solyc11g010100.1.1 | Tomato | cytosol | 82.87 | 79.91 |
| KRH31313 | Soybean | endoplasmic reticulum | 81.48 | 78.92 |
| VIT_07s0191g00030.t01 | Wine grape | cytosol | 81.94 | 78.32 |
| KRG97554 | Soybean | cytosol, endoplasmic reticulum | 80.56 | 78.03 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 98.15 | 77.66 |
| Solyc04g012180.2.1 | Tomato | cytosol, unclear | 79.63 | 77.48 |
| PGSC0003DMT400060649 | Potato | cytosol | 79.63 | 77.48 |
| CDX69843 | Canola | cytosol | 79.17 | 76.68 |
| CDX96994 | Canola | cytosol | 78.7 | 76.23 |
| Bra009040.1-P | Field mustard | cytosol | 78.7 | 76.23 |
| CDY18682 | Canola | cytosol | 78.7 | 75.56 |
| Bra037810.1-P | Field mustard | cytosol | 78.7 | 75.56 |
| AT5G65270.1 | Thale cress | cytosol | 78.7 | 75.22 |
| CDX81274 | Canola | cytosol | 78.24 | 74.45 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 78.7 | 74.24 |
| Bra011818.1-P | Field mustard | cytosol | 76.39 | 73.99 |
| CDY69836 | Canola | cytosol | 76.39 | 73.66 |
| AT4G39990.1 | Thale cress | cytosol | 74.07 | 71.43 |
| TraesCS5D01G179100.1 | Wheat | cytosol | 74.07 | 70.8 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 75.46 | 68.78 |
| TraesCS3D01G357500.1 | Wheat | cytosol | 62.96 | 62.67 |
| TraesCS5D01G498600.1 | Wheat | cytosol | 61.11 | 61.4 |
| CDX69367 | Canola | cytosol | 51.39 | 60.33 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 59.72 | 59.72 |
| TraesCS1D01G133200.1 | Wheat | cytosol, plastid | 59.72 | 59.45 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 59.26 | 59.26 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 58.8 | 58.8 |
| TraesCS7D01G368300.1 | Wheat | cytosol | 58.8 | 58.53 |
| TraesCS3D01G289400.1 | Wheat | cytosol | 59.26 | 57.92 |
| TraesCS5D01G529500.1 | Wheat | cytosol | 60.19 | 57.78 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 57.87 | 57.34 |
| TraesCS1D01G013300.1 | Wheat | cytosol | 58.33 | 56.5 |
| TraesCS7D01G381500.1 | Wheat | cytosol | 57.41 | 55.36 |
| TraesCS5D01G321800.1 | Wheat | cytosol | 57.41 | 50.61 |
| CDX69369 | Canola | cytosol | 74.54 | 39.46 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS1D01G136900 |
| EnsemblPlants:TraesCS1D01G136900.1 | TIGR:cd01868 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:184470873..184475504
Molecular Weight (calculated)
23866.5 Da
IEP (calculated)
8.209
GRAVY (calculated)
-0.228
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGEKVDYV FKVVLIGDSA VGKSQILARF ARNEFSLDSK ATIGVEFQTR TLVIDHKSVK AQIWDTAGQE RYRAVTSAYY RGALGALLVY DITKRQSFDH
101: IPRWLEELRG HADKNIVIML VGNKSDLEDE RAVSTEDAKE FAEKENLFFL ETSALQATNV ESAFQTVLSE IFKIHSKKNI VTDPKANGAA PPLAGKKVLV
201: PGPAQEIPKS KCCSSM
101: IPRWLEELRG HADKNIVIML VGNKSDLEDE RAVSTEDAKE FAEKENLFFL ETSALQATNV ESAFQTVLSE IFKIHSKKNI VTDPKANGAA PPLAGKKVLV
201: PGPAQEIPKS KCCSSM
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Arabidopsis Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.