Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400041813 | Potato | cytosol | 99.11 | 99.11 |
Solyc04g012180.2.1 | Tomato | cytosol, unclear | 91.96 | 92.79 |
VIT_07s0191g00030.t01 | Wine grape | cytosol | 91.07 | 90.27 |
KRH31313 | Soybean | endoplasmic reticulum | 87.95 | 88.34 |
KRG97554 | Soybean | cytosol, endoplasmic reticulum | 86.16 | 86.55 |
GSMUA_Achr3P01690_001 | Banana | cytosol | 82.59 | 84.47 |
Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 81.7 | 84.33 |
GSMUA_Achr8P18090_001 | Banana | cytosol | 81.25 | 83.49 |
Os10t0377400-01 | Rice | cytosol | 80.36 | 83.33 |
GSMUA_Achr3P21290_001 | Banana | cytosol | 81.25 | 83.11 |
OQU91938 | Sorghum | cytosol | 80.36 | 82.95 |
TraesCS1D01G136900.1 | Wheat | cytosol | 79.91 | 82.87 |
TraesCS1B01G152100.1 | Wheat | cytosol | 79.91 | 82.87 |
TraesCS1A01G131500.2 | Wheat | cytosol | 79.91 | 82.87 |
Zm00001d048222_P001 | Maize | extracellular, plasma membrane | 77.68 | 80.18 |
EER92725 | Sorghum | cytosol | 77.68 | 80.18 |
Zm00001d028002_P001 | Maize | mitochondrion | 77.23 | 79.72 |
Solyc01g086850.2.1 | Tomato | cytosol | 73.66 | 73.33 |
Solyc03g064020.2.1 | Tomato | cytosol | 68.3 | 68.3 |
Solyc10g079030.1.1 | Tomato | plastid | 68.3 | 67.7 |
HORVU1Hr1G034400.4 | Barley | plasma membrane | 78.12 | 64.1 |
Solyc05g052900.2.1 | Tomato | cytosol | 61.16 | 63.72 |
CDX69367 | Canola | cytosol | 52.23 | 63.59 |
Solyc03g079900.2.1 | Tomato | cytosol | 60.71 | 63.26 |
Solyc01g103380.2.1 | Tomato | nucleus | 59.82 | 62.62 |
Solyc06g005810.2.1 | Tomato | cytosol, unclear | 59.82 | 62.04 |
Solyc06g076450.2.1 | Tomato | plastid | 58.93 | 61.4 |
Solyc07g053480.2.1 | Tomato | cytosol, plastid | 59.38 | 61.29 |
Solyc01g096220.2.1 | Tomato | plastid | 66.07 | 60.91 |
Solyc10g045550.1.1 | Tomato | nucleus | 57.59 | 60.0 |
Solyc02g072180.2.1 | Tomato | cytosol | 58.04 | 59.91 |
Solyc10g008840.2.1 | Tomato | cytosol | 57.14 | 59.53 |
Solyc07g055290.2.1 | Tomato | plastid | 57.59 | 59.17 |
Solyc12g010790.1.1 | Tomato | cytosol, nucleus, unclear | 57.14 | 58.99 |
Solyc12g014080.1.1 | Tomato | cytosol | 56.7 | 58.53 |
Solyc03g006270.2.1 | Tomato | cytosol | 55.8 | 57.87 |
Protein Annotations
MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005768 | GO:GO:0005794 | GO:GO:0016787 | UniProt:K4D5H1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | SMART:SM00173 | SMART:SM00174 |
SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
EnsemblPlantsGene:Solyc11g010100.1 | EnsemblPlants:Solyc11g010100.1.1 | TIGRFAMs:TIGR00231 | UniParc:UPI00027694D9 | : | : |
Description
No Description!
Coordinates
chr11:+:3222459..3224358
Molecular Weight (calculated)
24574.3 Da
IEP (calculated)
6.793
GRAVY (calculated)
-0.199
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGGYGDA SQKIDYVFKV VLIGDSAVGK SQILARFARN EFSLDSKATI GVEFQTRTLV IQHKSVKAQI WDTAGQERYR AVTSAYYRGA VGALLVYDIT
101: KRQTFDHIPR WLEELRAHAD KNIVIMLIGN KTDLEDQRAV PTEDAKEFAQ KEGLFFLETS AMEATNIEDA FLTVLTEIFN IVNKKNLAAG DDQANGNPAS
201: LTGKKILVPG PAQVIPEKKA CCSS
101: KRQTFDHIPR WLEELRAHAD KNIVIMLIGN KTDLEDQRAV PTEDAKEFAQ KEGLFFLETS AMEATNIEDA FLTVLTEIFN IVNKKNLAAG DDQANGNPAS
201: LTGKKILVPG PAQVIPEKKA CCSS
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Arabidopsis Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.