Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039780 | Potato | cytosol, mitochondrion | 99.54 | 99.54 |
| Solyc07g053480.2.1 | Tomato | cytosol, plastid | 90.78 | 90.78 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 88.48 | 88.89 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 88.48 | 88.89 |
| OQU89311 | Sorghum | cytosol | 88.02 | 88.43 |
| Os09t0327100-01 | Rice | plasma membrane | 88.02 | 88.43 |
| VIT_19s0014g01820.t01 | Wine grape | cytosol | 88.02 | 88.02 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 87.56 | 87.96 |
| Solyc12g010790.1.1 | Tomato | cytosol, nucleus, unclear | 87.56 | 87.56 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 87.1 | 87.5 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 86.64 | 87.04 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 86.64 | 87.04 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 86.18 | 86.57 |
| Os05t0564400-02 | Rice | plasma membrane | 86.18 | 86.18 |
| EES19950 | Sorghum | cytosol | 85.25 | 85.65 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 84.79 | 85.19 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 84.79 | 84.79 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 84.33 | 84.72 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 84.33 | 84.72 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 84.33 | 84.72 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 83.87 | 84.26 |
| Solyc03g006270.2.1 | Tomato | cytosol | 83.41 | 83.8 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 83.41 | 83.8 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 73.27 | 83.68 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 82.95 | 83.33 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 82.95 | 83.33 |
| Solyc10g008840.2.1 | Tomato | cytosol | 82.49 | 83.26 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 74.19 | 80.5 |
| Solyc02g072180.2.1 | Tomato | cytosol | 78.8 | 78.8 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 76.96 | 76.61 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 76.96 | 76.61 |
| Solyc07g055290.2.1 | Tomato | plastid | 76.96 | 76.61 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 67.28 | 76.04 |
| Zm00001d043935_P001 | Maize | cytosol | 75.12 | 74.09 |
| OQU87300 | Sorghum | cytosol | 74.65 | 73.97 |
| Solyc01g103380.2.1 | Tomato | nucleus | 66.36 | 67.29 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 66.82 | 67.13 |
| Solyc06g076450.2.1 | Tomato | plastid | 66.36 | 66.98 |
| Solyc10g045550.1.1 | Tomato | nucleus | 65.44 | 66.05 |
| Solyc05g052900.2.1 | Tomato | cytosol | 64.06 | 64.65 |
| Solyc03g079900.2.1 | Tomato | cytosol | 64.06 | 64.65 |
| Solyc01g086850.2.1 | Tomato | cytosol | 60.37 | 58.22 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 66.36 | 56.92 |
| Solyc11g010100.1.1 | Tomato | cytosol | 58.53 | 56.7 |
| Solyc04g012180.2.1 | Tomato | cytosol, unclear | 57.6 | 56.31 |
| Solyc03g064020.2.1 | Tomato | cytosol | 57.6 | 55.8 |
| Solyc10g079030.1.1 | Tomato | plastid | 58.06 | 55.75 |
| Solyc01g096220.2.1 | Tomato | plastid | 57.14 | 51.03 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 76.96 | 48.27 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0016787 | UniProt:K4DCU3 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF649 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | EnsemblPlantsGene:Solyc12g014080.1 | EnsemblPlants:Solyc12g014080.1.1 |
| TIGRFAMs:TIGR00231 | UniParc:UPI000276A64A | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:4894053..4896737
Molecular Weight (calculated)
24291.8 Da
IEP (calculated)
5.428
GRAVY (calculated)
-0.256
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGYRAEDD YDYLFKLVLI GDSGVGKSNL LSRFSRNEFN LESKSTIGVE FATRSIKVDD KIVKAQIWDT AGQERYRAIT SAYYRGAVGA LVVYDITRHV
101: TFENVERWLK ELRDHTDQNI VIMLVGNKAD LRHLRAVSTE DAKAFAERES TFYMETSALE SLNVENAFTE VLTEIYRVVC RKALEVGDDP TALPKGQTIN
201: VGKDDVSAVK KVGCCSV
101: TFENVERWLK ELRDHTDQNI VIMLVGNKAD LRHLRAVSTE DAKAFAERES TFYMETSALE SLNVENAFTE VLTEIYRVVC RKALEVGDDP TALPKGQTIN
201: VGKDDVSAVK KVGCCSV
001: MAAYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
101: FENVERWLKE LRDHTDANIV IMFVGNKADL RHLRAVSTED AKAFAERENT FFMETSALES MNVENAFTEV LSQIYRVVSR KALDIGDDPA ALPKGQTINV
201: GSKDDVSAVK KVGCCSN
Arabidopsis Description
RABA1FRas-related protein RABA1f [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.