Factsheet for Solyc03g064020.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033664	Potato	cytosol	94.64	94.64
Solyc10g079030.1.1	Tomato	plastid	86.16	85.4
Bra001439.1-P	Field mustard	cytosol	80.8	81.9
CDX73833	Canola	cytosol	80.8	81.9
CDY00758	Canola	cytosol	80.8	81.9
AT3G12160.1	Thale cress	cytosol	80.8	81.53
CDY08447	Canola	cytosol	80.8	81.53
CDY42133	Canola	cytosol	80.8	81.53
VIT_08s0007g07800.t01	Wine grape	cytosol	80.8	81.17
CDY50568	Canola	cytosol	80.36	81.08
Bra038701.1-P	Field mustard	cytosol	80.36	81.08
CDY52622	Canola	cytosol	80.36	81.08
KRH75359	Soybean	endoplasmic reticulum	79.02	79.37
KRG88929	Soybean	cytosol	77.68	78.03
KRH33003	Soybean	cytosol	77.68	77.33
KRH71891	Soybean	cytosol	76.79	77.13
Solyc01g086850.2.1	Tomato	cytosol	75.45	75.11
Solyc04g012180.2.1	Tomato	cytosol, unclear	68.75	69.37
Bra034771.1-P	Field mustard	cytosol	80.8	68.82
Solyc11g010100.1.1	Tomato	cytosol	68.3	68.3
Solyc05g052900.2.1	Tomato	cytosol	60.27	62.79
Solyc03g079900.2.1	Tomato	cytosol	58.93	61.4
Solyc01g103380.2.1	Tomato	nucleus	58.48	61.22
Solyc10g045550.1.1	Tomato	nucleus	58.48	60.93
Solyc06g076450.2.1	Tomato	plastid	57.59	60.0
Solyc06g005810.2.1	Tomato	cytosol, unclear	57.14	59.26
Solyc07g055290.2.1	Tomato	plastid	57.59	59.17
Solyc10g008840.2.1	Tomato	cytosol	56.7	59.07
Solyc07g053480.2.1	Tomato	cytosol, plastid	57.14	58.99
Solyc12g014080.1.1	Tomato	cytosol	55.8	57.6
Solyc03g006270.2.1	Tomato	cytosol	55.36	57.41
Solyc02g072180.2.1	Tomato	cytosol	54.91	56.68
Solyc12g010790.1.1	Tomato	cytosol, nucleus, unclear	54.91	56.68
Solyc01g096220.2.1	Tomato	plastid	60.71	55.97

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0016787	UniProt:K4BHD7	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF863	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	EnsemblPlantsGene:Solyc03g064020.2
EnsemblPlants:Solyc03g064020.2.1	TIGRFAMs:TIGR00231	UniParc:UPI00027679E0	:	:	:

Description

No Description!

Coordinates

chr3:+:37223959..37225122

Molecular Weight (calculated)

24952.8 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.204

Length

224 amino acids

Sequence
(BLAST)

001: MSNLYGDYNQ KIDYVFKIVL TGDSAVGKSQ LLARFARNEF NLDSKATIGV EFQTKTLIID NRTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDLTKR
101: QSFDHMARWL EELRGHADKN IVIMLIGNKC DLGSLRAIPI EDAQEFAERE NLFFMETSAL ESTNVETAFM SILKEIYQIV GKKTLIADEG AEYAKSQSLK
201: GTRIIVPGHH SDSAAQGAGC CISS

Best Arabidopsis Sequence Match ( AT3G12160.1 )
(BLAST)

001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS

Arabidopsis Description

RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.