Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33003 | Soybean | cytosol | 95.96 | 95.11 |
| AT3G12160.1 | Thale cress | cytosol | 84.3 | 84.68 |
| Bra038701.1-P | Field mustard | cytosol | 84.3 | 84.68 |
| CDY08447 | Canola | cytosol | 84.3 | 84.68 |
| CDY42133 | Canola | cytosol | 84.3 | 84.68 |
| CDY50568 | Canola | cytosol | 84.3 | 84.68 |
| CDY52622 | Canola | cytosol | 84.3 | 84.68 |
| Bra001439.1-P | Field mustard | cytosol | 83.86 | 84.62 |
| CDX73833 | Canola | cytosol | 83.86 | 84.62 |
| CDY00758 | Canola | cytosol | 83.86 | 84.62 |
| VIT_08s0007g07800.t01 | Wine grape | cytosol | 81.61 | 81.61 |
| KRG88929 | Soybean | cytosol | 81.61 | 81.61 |
| KRH75359 | Soybean | endoplasmic reticulum | 81.17 | 81.17 |
| Solyc10g079030.1.1 | Tomato | plastid | 78.48 | 77.43 |
| Solyc03g064020.2.1 | Tomato | cytosol | 77.13 | 76.79 |
| PGSC0003DMT400033664 | Potato | cytosol | 77.13 | 76.79 |
| PGSC0003DMT400021064 | Potato | cytosol | 77.13 | 76.11 |
| Bra034771.1-P | Field mustard | cytosol | 84.3 | 71.48 |
| KRH31313 | Soybean | endoplasmic reticulum | 67.26 | 67.26 |
| KRG97554 | Soybean | cytosol, endoplasmic reticulum | 66.82 | 66.82 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 68.61 | 66.81 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 67.71 | 63.71 |
| KRH50137 | Soybean | cytosol, mitochondrion | 60.54 | 62.21 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 60.09 | 61.75 |
| KRH27074 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 60.09 | 61.47 |
| KRH25681 | Soybean | cytosol | 59.64 | 61.29 |
| KRH55839 | Soybean | endoplasmic reticulum | 59.64 | 61.29 |
| KRH30863 | Soybean | cytosol | 59.64 | 61.29 |
| KRH22259 | Soybean | cytosol, nucleus | 59.64 | 61.01 |
| KRH27364 | Soybean | endoplasmic reticulum | 58.74 | 60.37 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 58.74 | 60.37 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 58.3 | 59.91 |
| KRH29738 | Soybean | endoplasmic reticulum | 57.4 | 59.26 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 57.4 | 59.26 |
| KRH15036 | Soybean | cytosol, nucleus | 56.95 | 58.8 |
| KRG97821 | Soybean | cytosol, endoplasmic reticulum, nucleus | 56.95 | 58.53 |
| KRH73103 | Soybean | cytosol, endoplasmic reticulum, nucleus | 56.95 | 58.53 |
| KRH26288 | Soybean | endoplasmic reticulum | 56.95 | 58.53 |
| KRH06049 | Soybean | endoplasmic reticulum | 56.05 | 57.87 |
| KRH06418 | Soybean | cytosol | 61.88 | 56.56 |
| KRH22324 | Soybean | cytosol, endoplasmic reticulum | 55.16 | 56.42 |
| KRH27001 | Soybean | cytosol, endoplasmic reticulum | 55.16 | 56.42 |
| KRH47850 | Soybean | cytosol | 61.44 | 55.92 |
| KRH68938 | Soybean | cytosol | 58.74 | 55.51 |
| KRH27503 | Soybean | cytosol | 56.5 | 55.26 |
| KRG97215 | Soybean | cytosol | 58.3 | 55.08 |
| KRH36458 | Soybean | cytosol | 56.05 | 54.82 |
Protein Annotations
| EntrezGene:100820137 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EMBL:ACUP02001103 | EnsemblPlantsGene:GLYMA_02G176000 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0016787 |
| UniProt:I1JG34 | EnsemblPlants:KRH71891 | ProteinID:KRH71891 | ProteinID:KRH71891.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF863 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI000296BA4A | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:28704515..28707168
Molecular Weight (calculated)
24738.7 Da
IEP (calculated)
7.340
GRAVY (calculated)
-0.191
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSNLYGEYN HKIDYVFKVV LVGDSAVGKT QLLARFAKNQ FNVDSKATIG VEFQTKTLII DKKTVKAQIW DTAGQERYRA VTSAYYRGAV GAMLVYDVTR
101: RPSFDNMAKW LEELRGHADK NIVVMLIGNK CDLGTLRAVP TEDAEEFAQR ENLFFMETSA LESTNVETAF LTILTEIYRL VSKKTLTAND DADPSGISGL
201: LKGTKIIVPS QDINAGEKKG GCC
101: RPSFDNMAKW LEELRGHADK NIVVMLIGNK CDLGTLRAVP TEDAEEFAQR ENLFFMETSA LESTNVETAF LTILTEIYRL VSKKTLTAND DADPSGISGL
201: LKGTKIIVPS QDINAGEKKG GCC
001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
Arabidopsis Description
RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.