Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42133 | Canola | cytosol | 100.0 | 100.0 |
| CDY50568 | Canola | cytosol | 97.75 | 97.75 |
| CDY52622 | Canola | cytosol | 97.75 | 97.75 |
| CDY00758 | Canola | cytosol | 96.85 | 97.29 |
| CDX73833 | Canola | cytosol | 96.4 | 96.83 |
| KRH33003 | Soybean | cytosol | 88.29 | 87.11 |
| VIT_08s0007g07800.t01 | Wine grape | cytosol | 86.04 | 85.65 |
| Bra034771.1-P | Field mustard | cytosol | 100.0 | 84.41 |
| KRH71891 | Soybean | cytosol | 84.68 | 84.3 |
| Solyc10g079030.1.1 | Tomato | plastid | 83.33 | 81.86 |
| PGSC0003DMT400033664 | Potato | cytosol | 81.98 | 81.25 |
| Solyc03g064020.2.1 | Tomato | cytosol | 81.53 | 80.8 |
| PGSC0003DMT400021064 | Potato | cytosol | 81.98 | 80.53 |
| CDX86332 | Canola | cytosol | 79.28 | 78.92 |
| CDY54519 | Canola | cytosol | 78.83 | 78.48 |
| CDX69843 | Canola | cytosol | 67.12 | 66.82 |
| CDX96994 | Canola | cytosol | 67.12 | 66.82 |
| CDY18682 | Canola | cytosol | 67.12 | 66.22 |
| CDX81274 | Canola | cytosol | 66.67 | 65.2 |
| CDY69836 | Canola | cytosol | 65.77 | 65.18 |
| CDX90160 | Canola | cytosol | 59.01 | 60.93 |
| CDY09919 | Canola | cytosol | 58.56 | 60.75 |
| CDY06256 | Canola | cytosol | 58.56 | 60.75 |
| CDY33014 | Canola | cytosol | 59.01 | 60.37 |
| CDY50888 | Canola | cytosol | 59.01 | 60.37 |
| CDY35757 | Canola | cytosol | 59.01 | 60.09 |
| CDY02867 | Canola | cytosol | 58.56 | 59.91 |
| CDY71720 | Canola | cytosol | 58.56 | 59.91 |
| CDX93495 | Canola | cytosol | 58.56 | 59.91 |
| CDY32661 | Canola | cytosol | 58.56 | 59.91 |
| CDY06703 | Canola | cytosol | 58.11 | 59.72 |
| CDX96799 | Canola | cytosol | 58.11 | 59.72 |
| CDX94631 | Canola | cytosol | 58.56 | 59.63 |
| CDY15659 | Canola | cytosol | 58.56 | 59.63 |
| CDY34094 | Canola | cytosol | 58.56 | 59.63 |
| CDY30818 | Canola | cytosol | 58.56 | 59.63 |
| CDX76522 | Canola | cytosol | 58.11 | 59.45 |
| CDY35128 | Canola | cytosol | 57.66 | 59.26 |
| CDX99430 | Canola | cytosol | 56.76 | 58.88 |
| CDX82451 | Canola | cytosol | 57.66 | 58.72 |
| CDY20100 | Canola | cytosol | 57.66 | 58.72 |
| CDY62557 | Canola | cytosol | 56.76 | 58.6 |
| CDY64916 | Canola | cytosol | 56.76 | 58.6 |
| CDY01540 | Canola | cytosol | 57.21 | 58.53 |
| CDY55638 | Canola | cytosol | 57.21 | 58.53 |
| CDX75804 | Canola | cytosol | 56.76 | 57.8 |
| CDY40023 | Canola | cytosol | 55.86 | 57.41 |
| CDX79548 | Canola | cytosol | 50.0 | 56.35 |
| CDY09976 | Canola | cytosol | 56.31 | 56.05 |
| CDY06210 | Canola | cytosol | 56.31 | 56.05 |
| CDX87774 | Canola | cytosol | 54.5 | 56.02 |
| CDY60884 | Canola | cytosol | 54.95 | 54.71 |
| CDY15192 | Canola | cytosol | 58.11 | 54.43 |
| CDX90017 | Canola | cytosol | 58.11 | 54.43 |
| CDX69367 | Canola | cytosol | 42.79 | 51.63 |
| CDX86101 | Canola | cytosol | 58.56 | 50.78 |
| CDX80299 | Canola | cytosol | 59.01 | 50.78 |
| CDX81790 | Canola | plastid | 57.66 | 47.94 |
| CDX99094 | Canola | cytosol | 58.56 | 45.3 |
| CDX69369 | Canola | cytosol | 65.77 | 35.78 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078F5R2 | UniProt:A0A078F5R2 | EnsemblPlants:CDY08447 | ProteinID:CDY08447 |
| ProteinID:CDY08447.1 | ProteinID:CDY42133.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00000210001 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF863 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI0004EB67D0 | SEG:seg | : | : | : |
Description
BnaA05g26830DBnaA05g26830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5R2]
Coordinates
chrLK031986:+:209003..210235
Molecular Weight (calculated)
24714.5 Da
IEP (calculated)
5.882
GRAVY (calculated)
-0.284
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLQGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKTLTADDD DADGNSSLLK
201: GTRIIIPSEQ ETGKRGGCCG KS
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKTLTADDD DADGNSSLLK
201: GTRIIIPSEQ ETGKRGGCCG KS
001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS
Arabidopsis Description
RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.