Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009040.1-P | Field mustard | cytosol | 99.55 | 99.55 |
| CDX96994 | Canola | cytosol | 99.55 | 99.55 |
| CDY18682 | Canola | cytosol | 87.44 | 86.67 |
| CDX81274 | Canola | cytosol | 87.44 | 85.9 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 81.61 | 79.48 |
| Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 77.13 | 79.26 |
| TraesCS1A01G131500.2 | Wheat | cytosol | 76.68 | 79.17 |
| TraesCS1B01G152100.1 | Wheat | cytosol | 76.68 | 79.17 |
| TraesCS1D01G136900.1 | Wheat | cytosol | 76.68 | 79.17 |
| OQU91938 | Sorghum | cytosol | 76.68 | 78.8 |
| Os10t0377400-01 | Rice | cytosol | 75.78 | 78.24 |
| GSMUA_Achr3P01690_001 | Banana | cytosol | 76.68 | 78.08 |
| EER92725 | Sorghum | cytosol | 74.44 | 76.5 |
| CDY69836 | Canola | cytosol | 76.68 | 76.34 |
| GSMUA_Achr8P18090_001 | Banana | cytosol | 74.44 | 76.15 |
| Zm00001d048222_P001 | Maize | extracellular, plasma membrane | 73.99 | 76.04 |
| GSMUA_Achr3P21290_001 | Banana | cytosol | 74.44 | 75.8 |
| Zm00001d028002_P001 | Maize | mitochondrion | 73.54 | 75.58 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 77.58 | 73.0 |
| CDY00758 | Canola | cytosol | 68.16 | 68.78 |
| CDX73833 | Canola | cytosol | 68.16 | 68.78 |
| CDX86332 | Canola | cytosol | 68.61 | 68.61 |
| CDY54519 | Canola | cytosol | 68.16 | 68.16 |
| CDY52622 | Canola | cytosol | 67.71 | 68.02 |
| CDY50568 | Canola | cytosol | 67.71 | 68.02 |
| CDY42133 | Canola | cytosol | 66.82 | 67.12 |
| CDY08447 | Canola | cytosol | 66.82 | 67.12 |
| CDX69367 | Canola | cytosol | 53.36 | 64.67 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 75.78 | 61.9 |
| CDY33014 | Canola | cytosol | 60.09 | 61.75 |
| CDX99430 | Canola | cytosol | 59.19 | 61.68 |
| CDX90160 | Canola | cytosol | 59.19 | 61.4 |
| CDY64916 | Canola | cytosol | 59.19 | 61.4 |
| CDY62557 | Canola | cytosol | 59.19 | 61.4 |
| CDY32661 | Canola | cytosol | 59.19 | 60.83 |
| CDY02867 | Canola | cytosol | 59.19 | 60.83 |
| CDX96799 | Canola | cytosol | 58.74 | 60.65 |
| CDY06703 | Canola | cytosol | 58.74 | 60.65 |
| CDY35757 | Canola | cytosol | 59.19 | 60.55 |
| CDY09919 | Canola | cytosol | 57.85 | 60.28 |
| CDY06256 | Canola | cytosol | 57.85 | 60.28 |
| CDX94631 | Canola | cytosol | 58.74 | 60.09 |
| CDY34094 | Canola | cytosol | 58.74 | 60.09 |
| CDY30818 | Canola | cytosol | 58.74 | 60.09 |
| CDY15659 | Canola | cytosol | 58.74 | 60.09 |
| CDY71720 | Canola | cytosol | 58.3 | 59.91 |
| CDX87774 | Canola | cytosol | 57.85 | 59.72 |
| CDY35128 | Canola | cytosol | 57.85 | 59.72 |
| CDY40023 | Canola | cytosol | 56.95 | 58.8 |
| CDY20100 | Canola | cytosol | 56.95 | 58.26 |
| CDX82451 | Canola | cytosol | 56.95 | 58.26 |
| CDY50888 | Canola | cytosol | 56.05 | 57.6 |
| CDY06210 | Canola | cytosol | 57.4 | 57.4 |
| CDX75804 | Canola | cytosol | 56.05 | 57.34 |
| CDY09976 | Canola | cytosol | 56.95 | 56.95 |
| CDX76522 | Canola | cytosol | 55.16 | 56.68 |
| CDY01540 | Canola | cytosol | 55.16 | 56.68 |
| CDX93495 | Canola | cytosol | 55.16 | 56.68 |
| CDY55638 | Canola | cytosol | 55.16 | 56.68 |
| CDX79548 | Canola | cytosol | 49.33 | 55.84 |
| CDX90017 | Canola | cytosol | 57.4 | 54.01 |
| CDY15192 | Canola | cytosol | 57.4 | 54.01 |
| CDY60884 | Canola | cytosol | 52.02 | 52.02 |
| CDX80299 | Canola | cytosol | 60.09 | 51.94 |
| CDX86101 | Canola | cytosol | 57.85 | 50.39 |
| CDX81790 | Canola | plastid | 57.4 | 47.94 |
| CDX99094 | Canola | cytosol | 57.85 | 44.95 |
| CDX69369 | Canola | cytosol | 75.78 | 41.42 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078C485 | EnsemblPlants:CDX69843 | ProteinID:CDX69843 | ProteinID:CDX69843.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00135902001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EEB324 | : |
Description
BnaA10g21920D
Coordinates
chrLK031790:-:2061380..2062364
Molecular Weight (calculated)
24389.0 Da
IEP (calculated)
5.775
GRAVY (calculated)
-0.217
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGGYGDPS QKIDYVFKLV LIGDSGVGKS QILSRYARNE FSLDSKATIG VEFQTRTLVM DHKSVKAQIW DTAGQERYRA VTSAYYRGAV GAMLVYDVTR
101: RQTFDHIPRW LEELRGHADK NIVIILVGNK SDLEDQRAIS TEDAKEFAET EGLFFLETSA LNAVNVETAF STVLTEIFNI VNKKNLVAGE GNGDPGSLAG
201: KKIDIVPGPA QVIPTKSGMC CNS
101: RQTFDHIPRW LEELRGHADK NIVIILVGNK SDLEDQRAIS TEDAKEFAET EGLFFLETSA LNAVNVETAF STVLTEIFNI VNKKNLVAGE GNGDPGSLAG
201: KKIDIVPGPA QVIPTKSGMC CNS
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Arabidopsis Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.