Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G16920.1 | Thale cress | cytosol | 96.76 | 96.76 |
| CDY35128 | Canola | cytosol | 95.37 | 95.37 |
| CDY40023 | Canola | cytosol | 93.98 | 93.98 |
| KRH27364 | Soybean | endoplasmic reticulum | 87.5 | 87.1 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 87.04 | 86.64 |
| GSMUA_Achr3P15680_001 | Banana | plasma membrane | 83.33 | 82.95 |
| GSMUA_Achr4P02540_001 | Banana | cytosol | 73.61 | 82.81 |
| GSMUA_Achr9P05610_001 | Banana | cytosol | 82.41 | 82.79 |
| CDX99430 | Canola | cytosol | 80.56 | 81.31 |
| GSMUA_Achr8P27780_001 | Banana | cytosol | 67.59 | 81.11 |
| CDY64916 | Canola | cytosol | 80.56 | 80.93 |
| CDY62557 | Canola | cytosol | 80.56 | 80.93 |
| GSMUA_Achr6P31790_001 | Banana | cytosol | 61.57 | 80.12 |
| TraesCS3D01G289400.1 | Wheat | cytosol | 81.48 | 79.64 |
| CDX87774 | Canola | cytosol | 79.63 | 79.63 |
| TraesCS3B01G324300.1 | Wheat | cytosol, golgi | 81.02 | 79.19 |
| TraesCS3A01G289600.1 | Wheat | cytosol | 81.02 | 79.19 |
| CDX81790 | Canola | plastid | 97.22 | 78.65 |
| EES19812 | Sorghum | cytosol | 79.63 | 78.18 |
| CDX79548 | Canola | cytosol | 68.52 | 75.13 |
| CDX82451 | Canola | cytosol | 75.0 | 74.31 |
| CDX75804 | Canola | cytosol | 75.0 | 74.31 |
| VIT_19s0014g01160.t01 | Wine grape | extracellular | 86.57 | 74.21 |
| CDY06210 | Canola | cytosol | 76.39 | 73.99 |
| CDY09976 | Canola | cytosol | 75.93 | 73.54 |
| CDY20100 | Canola | cytosol | 73.61 | 72.94 |
| CDX90160 | Canola | cytosol | 72.22 | 72.56 |
| CDY30818 | Canola | cytosol | 73.15 | 72.48 |
| CDY34094 | Canola | cytosol | 73.15 | 72.48 |
| CDY35757 | Canola | cytosol | 72.22 | 71.56 |
| CDX94631 | Canola | cytosol | 71.76 | 71.1 |
| CDY15659 | Canola | cytosol | 71.76 | 71.1 |
| CDY01540 | Canola | cytosol | 71.3 | 70.97 |
| CDY55638 | Canola | cytosol | 71.3 | 70.97 |
| CDX76522 | Canola | cytosol | 70.37 | 70.05 |
| CDY33014 | Canola | cytosol | 68.98 | 68.66 |
| CDY02867 | Canola | cytosol | 68.52 | 68.2 |
| CDY50888 | Canola | cytosol | 68.52 | 68.2 |
| CDY32661 | Canola | cytosol | 68.52 | 68.2 |
| CDY06256 | Canola | cytosol | 66.67 | 67.29 |
| CDY09919 | Canola | cytosol | 66.67 | 67.29 |
| CDX93495 | Canola | cytosol | 67.59 | 67.28 |
| CDY06703 | Canola | cytosol | 67.13 | 67.13 |
| CDY71720 | Canola | cytosol | 66.2 | 65.9 |
| CDY60884 | Canola | cytosol | 65.28 | 63.23 |
| HORVU3Hr1G071740.1 | Barley | plastid | 81.48 | 61.54 |
| CDX86332 | Canola | cytosol | 61.57 | 59.64 |
| CDY00758 | Canola | cytosol | 60.65 | 59.28 |
| CDX73833 | Canola | cytosol | 60.65 | 59.28 |
| CDX96994 | Canola | cytosol | 61.11 | 59.19 |
| CDY54519 | Canola | cytosol | 61.11 | 59.19 |
| CDX69843 | Canola | cytosol | 60.65 | 58.74 |
| CDY52622 | Canola | cytosol | 60.19 | 58.56 |
| CDY50568 | Canola | cytosol | 60.19 | 58.56 |
| CDX80299 | Canola | cytosol | 69.44 | 58.14 |
| CDY08447 | Canola | cytosol | 59.72 | 58.11 |
| CDY42133 | Canola | cytosol | 59.72 | 58.11 |
| CDY69836 | Canola | cytosol | 58.8 | 56.7 |
| CDY18682 | Canola | cytosol | 58.8 | 56.44 |
| CDX86101 | Canola | cytosol | 66.2 | 55.86 |
| CDX81274 | Canola | cytosol | 58.33 | 55.51 |
| CDX99094 | Canola | cytosol | 66.2 | 49.83 |
| CDY15192 | Canola | cytosol | 51.39 | 46.84 |
| CDX90017 | Canola | cytosol | 51.39 | 46.84 |
| CDX69367 | Canola | cytosol | 37.5 | 44.02 |
| CDX69369 | Canola | cytosol | 59.26 | 31.37 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078E7W8 | EnsemblPlants:CDX96799 | ProteinID:CDX96799 | ProteinID:CDX96799.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00103032001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF592 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE9DFD | : |
Description
BnaA08g23420D
Coordinates
chrLK031895:+:1012057..1013665
Molecular Weight (calculated)
24072.5 Da
IEP (calculated)
5.204
GRAVY (calculated)
-0.383
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYKVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDEK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDTTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEEAFAEV LTQIYRITSK KQMEAGEDGN GSVPKGEKIE
201: VKNDVSALKK LGCCSS
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEEAFAEV LTQIYRITSK KQMEAGEDGN GSVPKGEKIE
201: VKNDVSALKK LGCCSS
001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
Arabidopsis Description
RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.