Factsheet for HORVU3Hr1G071740.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G289600.1	Wheat	cytosol	76.92	99.55
TraesCS3B01G324300.1	Wheat	cytosol, golgi	76.92	99.55
TraesCS3D01G289400.1	Wheat	cytosol	76.57	99.09
EES19812	Sorghum	cytosol	66.08	85.91
GSMUA_Achr4P02540_001	Banana	cytosol	57.34	85.42
GSMUA_Achr3P15680_001	Banana	plasma membrane	63.99	84.33
GSMUA_Achr9P05610_001	Banana	cytosol	63.29	84.19
AT1G16920.1	Thale cress	cytosol	62.59	82.87
CDY35128	Canola	cytosol	62.24	82.41
GSMUA_Achr8P27780_001	Banana	cytosol	51.75	82.22
KRH27364	Soybean	endoplasmic reticulum	62.24	82.03
Bra026016.1-P	Field mustard	cytosol	61.89	81.94
KRH21946	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	61.89	81.57
CDY40023	Canola	cytosol	61.54	81.48
CDX96799	Canola	cytosol	61.54	81.48
GSMUA_Achr6P31790_001	Banana	cytosol	46.85	80.72
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	58.04	76.85
VIT_19s0014g01160.t01	Wine grape	extracellular	66.43	75.4
HORVU7Hr1G089120.1	Barley	cytosol	62.59	72.47
CDX81790	Canola	plastid	64.34	68.91
HORVU5Hr1G114250.1	Barley	cytosol, plasma membrane	49.65	66.05
HORVU1Hr1G001920.2	Barley	cytosol	50.35	64.0
HORVU1Hr1G033390.2	Barley	cytosol	47.2	62.21
HORVU5Hr1G080990.3	Barley	cytosol, plasma membrane, vacuole	37.06	47.96
HORVU7Hr1G091490.3	Barley	cytosol	38.11	47.81
HORVU3Hr1G085710.1	Barley	cytosol, plastid	52.1	47.45
HORVU1Hr1G034400.4	Barley	plasma membrane	44.06	46.15
HORVU5Hr1G120210.4	Barley	plastid	50.7	45.89

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	UniProt:A0A287LL74	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950
GO:GO:0008150	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0042538
GO:GO:0060627	EnsemblPlantsGene:HORVU3Hr1G071740	EnsemblPlants:HORVU3Hr1G071740.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF544	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000B475019
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:542299067..542304514

Molecular Weight (calculated)

30773.0 Da

IEP (calculated)

8.047

GRAVY (calculated)

-0.360

Length

286 amino acids

Sequence
(BLAST)

001: SDLLRLRSSS KAANPVHTVS LSPITAPSSS TATPTLHPAR PREIQSLALA GRGGGRSRTR ETGKGMAGSG GGAYRAEDDY DYLFKAVIIG DSGVGKSNLL
101: SRFTKNEFCL ESKSTIGVEF ATRSLQVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT FDNVARWLKE LRDHTDPSIV VMLVGNKSDL
201: RHLVAVSTED GQEYAEAESL YFMETSALDA TNVDNAFSEV LTQIYRIASR KTVDAGDDGS SAPSKGENIN VKDDVSSLKR AGCCSS

Best Arabidopsis Sequence Match ( AT1G16920.1 )
(BLAST)

001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN

Arabidopsis Description

RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.