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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G396200.1 Wheat cytosol, golgi 68.47 99.54
TraesCS3D01G357500.1 Wheat cytosol 68.47 99.08
TraesCS3A01G364100.1 Wheat cytosol 67.83 98.61
Os01t0848700-01 Rice cytosol, plasma membrane 65.29 94.91
HORVU5Hr1G114250.1 Barley cytosol, plasma membrane 58.92 86.05
HORVU1Hr1G033390.2 Barley cytosol 49.36 71.43
HORVU1Hr1G001920.2 Barley cytosol 47.45 66.22
HORVU5Hr1G056470.1 Barley cytosol, plasma membrane 45.54 66.2
HORVU7Hr1G089120.1 Barley cytosol 46.5 59.11
HORVU3Hr1G071740.1 Barley plastid 47.45 52.1
HORVU5Hr1G080990.3 Barley cytosol, plasma membrane, vacuole 35.03 49.77
HORVU7Hr1G091490.3 Barley cytosol 35.99 49.56
HORVU1Hr1G034400.4 Barley plasma membrane 42.68 49.08
HORVU5Hr1G120210.4 Barley plastid 49.36 49.05
Protein Annotations
MapMan:22.8.1.1Gene3D:3.40.50.300UniProt:A0A287M214GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787EnsemblPlantsGene:HORVU3Hr1G085710EnsemblPlants:HORVU3Hr1G085710.1
InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419PANTHER:PTHR24073PANTHER:PTHR24073:SF458
SMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176SMART:SM00177SUPFAM:SSF52540
InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI000B47927CSEG:seg:
Description
No Description!
Coordinates
chrchr3H:+:613678038..613680638
Molecular Weight (calculated)
33674.9 Da
IEP (calculated)
8.729
GRAVY (calculated)
-0.312
Length
314 amino acids
Sequence
(BLAST)
001: TARDPSPPPF LPSSPPLVGR SFLGSACPPP HPSPPPIPLP LGPASSVASR PVPSPPGKRS QASTRSSVLI RVGCSLAGSS IGVRGRRGGD GEEGREAAMA
101: HRVDNEYDYL FKIVLIGDSG VGKSNILSRF TRNEFCLESK STIGVEFATR TLQIEGKTVK AQIWDTAGQE RYRAITSAYY RGAVGALLVF DITKRQTFDN
201: VQRWLRELRD HADANIVVMM VGNKSDLNHL RSVPEEDSQA FSEKEGLSFL ETSALEAINV EKAFHTVLSE IHQIVSKKAL AAQESAAANG RSMQGTTINV
301: AEPSTNAKGS CCSS
Best Arabidopsis Sequence Match ( AT3G46830.2 )
(BLAST)
001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
Arabidopsis Description
RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.