Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G150900.1 | Wheat | cytosol | 98.16 | 98.16 |
| TraesCS1D01G133200.1 | Wheat | cytosol, plastid | 97.7 | 97.7 |
| EES17935 | Sorghum | cytosol | 91.24 | 91.24 |
| HORVU5Hr1G114250.1 | Barley | cytosol, plasma membrane | 76.04 | 76.74 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 62.21 | 62.5 |
| HORVU1Hr1G001920.2 | Barley | cytosol | 64.52 | 62.22 |
| HORVU7Hr1G089120.1 | Barley | cytosol | 61.75 | 54.25 |
| HORVU3Hr1G085710.1 | Barley | cytosol, plastid | 71.43 | 49.36 |
| HORVU3Hr1G071740.1 | Barley | plastid | 62.21 | 47.2 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 58.99 | 46.89 |
| HORVU7Hr1G091490.3 | Barley | cytosol | 48.85 | 46.49 |
| HORVU5Hr1G080990.3 | Barley | cytosol, plasma membrane, vacuole | 45.62 | 44.8 |
| HORVU5Hr1G120210.4 | Barley | plastid | 63.59 | 43.67 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G033390 | EnsemblPlants:HORVU1Hr1G033390.2 | UniProt:M0W8Z3 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF600 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00019AA91C | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:+:213203287..213205638
Molecular Weight (calculated)
23749.4 Da
IEP (calculated)
8.643
GRAVY (calculated)
-0.156
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRVDHEYS YLFKMVLIGD SGVGKSNILS RFTRNHFSLD SKSTIGVEFA TKSLQMEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKKQSF
101: DNVNRWLHEL RDHADSSIVI MMVGNKSDLT HLRAVSEDQG KALAEKEGLF FLETSAMEAV NVVEAFQTII TEVYGIVNKK ALAAKEAAAA AVPLPSQGKT
201: ISVDSTVGNS KRACCNT
101: DNVNRWLHEL RDHADSSIVI MMVGNKSDLT HLRAVSEDQG KALAEKEGLF FLETSAMEAV NVVEAFQTII TEVYGIVNKK ALAAKEAAAA AVPLPSQGKT
201: ISVDSTVGNS KRACCNT
001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
Arabidopsis Description
RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.