Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G074990.1 | |
| HORVU7Hr1G003710.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G09630.1 | HORVU2Hr1G074990.1 | AT2G23420.1 | 21798944 |
| AT1G09630.1 | HORVU7Hr1G003710.1 | AT4G17720.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G018900.1 | Wheat | cytosol | 95.11 | 95.96 |
| TraesCS1D01G013300.1 | Wheat | cytosol | 94.67 | 95.52 |
| TraesCS1A01G015400.1 | Wheat | cytosol | 94.22 | 95.07 |
| Os05t0105100-01 | Rice | golgi, plasma membrane | 87.56 | 89.55 |
| OQU77196 | Sorghum | cytosol | 87.11 | 89.09 |
| GSMUA_Achr2P05630_001 | Banana | cytosol | 80.0 | 83.72 |
| GSMUA_Achr6P28910_001 | Banana | cytosol | 79.56 | 82.49 |
| Solyc01g103380.2.1 | Tomato | nucleus | 76.89 | 80.84 |
| PGSC0003DMT400064102 | Potato | cytosol | 76.89 | 80.84 |
| Bra020006.1-P | Field mustard | cytosol | 77.78 | 80.65 |
| CDY50888 | Canola | cytosol | 77.78 | 80.65 |
| CDX93495 | Canola | cytosol | 77.33 | 80.18 |
| KRH26288 | Soybean | endoplasmic reticulum | 76.89 | 79.72 |
| AT1G09630.1 | Thale cress | cytosol | 76.44 | 79.26 |
| VIT_12s0035g01140.t01 | Wine grape | extracellular | 75.56 | 79.07 |
| KRH06049 | Soybean | endoplasmic reticulum | 75.56 | 78.7 |
| Solyc10g045550.1.1 | Tomato | nucleus | 74.67 | 78.14 |
| HORVU5Hr1G114250.1 | Barley | cytosol, plasma membrane | 69.78 | 73.02 |
| GSMUA_Achr6P18430_001 | Banana | cytosol | 71.11 | 71.11 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 64.44 | 67.13 |
| PGSC0003DMT400045950 | Potato | cytosol | 75.56 | 66.67 |
| HORVU1Hr1G033390.2 | Barley | cytosol | 62.22 | 64.52 |
| HORVU7Hr1G089120.1 | Barley | cytosol | 64.44 | 58.7 |
| HORVU3Hr1G071740.1 | Barley | plastid | 64.0 | 50.35 |
| HORVU5Hr1G120210.4 | Barley | plastid | 68.89 | 49.05 |
| HORVU7Hr1G091490.3 | Barley | cytosol | 48.89 | 48.25 |
| HORVU3Hr1G085710.1 | Barley | cytosol, plastid | 66.22 | 47.45 |
| HORVU5Hr1G080990.3 | Barley | cytosol, plasma membrane, vacuole | 46.22 | 47.06 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 55.56 | 45.79 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | UniProt:A0A287EG05 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G001920 | EnsemblPlants:HORVU1Hr1G001920.2 |
| InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF613 |
| SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000B472026 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:-:4165180..4167165
Molecular Weight (calculated)
24377.8 Da
IEP (calculated)
5.460
GRAVY (calculated)
-0.287
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGGGRSG RGEEEYDYLF KVVLIGDSGV GKSNLLSRFT RNEFCLESKS TIGVEFATRT LQVEGKIIKA QIWDTAGQER YRAITSAYYR GALGAVLVYD
101: VTKPTTFENI SRWLKELRDH ADANIRIMLV GNKTDLKHLR AVTTDDAGSY AEAEGLSYIE TSALEAMNVE EAFQLILGDI YRTISKKAVA SEEDRAAAAG
201: VKEGKTINVA AAADNGGEKK QCCSA
101: VTKPTTFENI SRWLKELRDH ADANIRIMLV GNKTDLKHLR AVTTDDAGSY AEAEGLSYIE TSALEAMNVE EAFQLILGDI YRTISKKAVA SEEDRAAAAG
201: VKEGKTINVA AAADNGGEKK QCCSA
001: MARRPDEEYD YLFKVVLIGD SGVGKSNLLS RFTRNEFCLE SKSTIGVEFA TRTLQVEGRT VKAQIWDTAG QERYRAITSA YYRGALGALL VYDVTKPTTF
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
Arabidopsis Description
RABA2ARas-related protein RABA2a [Source:UniProtKB/Swiss-Prot;Acc:O04486]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.