Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G013300.1 | Wheat | cytosol | 97.76 | 97.76 |
| TraesCS1A01G015400.1 | Wheat | cytosol | 97.31 | 97.31 |
| HORVU1Hr1G001920.2 | Barley | cytosol | 95.96 | 95.11 |
| Os05t0105100-01 | Rice | golgi, plasma membrane | 87.44 | 88.64 |
| OQU77196 | Sorghum | cytosol | 87.0 | 88.18 |
| GSMUA_Achr2P05630_001 | Banana | cytosol | 78.92 | 81.86 |
| GSMUA_Achr6P28910_001 | Banana | cytosol | 78.92 | 81.11 |
| Solyc01g103380.2.1 | Tomato | nucleus | 75.34 | 78.5 |
| PGSC0003DMT400064102 | Potato | cytosol | 75.34 | 78.5 |
| KRH26288 | Soybean | endoplasmic reticulum | 76.23 | 78.34 |
| Bra020006.1-P | Field mustard | cytosol | 75.78 | 77.88 |
| CDY50888 | Canola | cytosol | 75.78 | 77.88 |
| VIT_12s0035g01140.t01 | Wine grape | extracellular | 74.89 | 77.67 |
| CDX93495 | Canola | cytosol | 75.34 | 77.42 |
| KRH06049 | Soybean | endoplasmic reticulum | 74.89 | 77.31 |
| AT1G09630.1 | Thale cress | cytosol | 74.44 | 76.5 |
| Solyc10g045550.1.1 | Tomato | nucleus | 73.54 | 76.28 |
| TraesCS5B01G498600.1 | Wheat | cytosol, plastid | 68.61 | 71.16 |
| GSMUA_Achr6P18430_001 | Banana | cytosol | 69.96 | 69.33 |
| TraesCS3B01G396200.1 | Wheat | cytosol, golgi | 66.37 | 68.52 |
| TraesCS7B01G273300.1 | Wheat | plastid | 66.37 | 68.2 |
| TraesCS5B01G530800.1 | Wheat | cytosol | 68.16 | 68.16 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 65.92 | 68.06 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 65.02 | 67.13 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 64.13 | 66.2 |
| PGSC0003DMT400045950 | Potato | cytosol | 74.44 | 65.1 |
| TraesCS3B01G324300.1 | Wheat | cytosol, golgi | 63.68 | 64.25 |
| TraesCS1B01G150900.1 | Wheat | cytosol | 61.88 | 63.59 |
| TraesCS1B01G152100.1 | Wheat | cytosol | 56.95 | 58.8 |
| TraesCS5B01G171900.1 | Wheat | cytosol | 56.95 | 56.19 |
| TraesCS7B01G287900.1 | Wheat | cytosol | 52.91 | 52.68 |
| TraesCS5B01G316300.1 | Wheat | cytosol | 51.12 | 45.97 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 63.23 | 40.75 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF613 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS1B01G018900 |
| EnsemblPlants:TraesCS1B01G018900.1 | TIGR:cd01868 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:+:8946611..8948376
Molecular Weight (calculated)
24172.6 Da
IEP (calculated)
5.204
GRAVY (calculated)
-0.297
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGGRGRG EEEYDYLFKV VLIGDSGVGK SNLLSRFTRN EFCLESKSTI GVEFATRTLH VEGKIIKAQI WDTAGQERYR AITSAYYRGA LGAVLVYDVT
101: KPTTFENIAR WLKELRDHAD ANIRIMLVGN KTDLKDLRAV PTDDAGGYAE AEGLSYIETS ALEAMNVEEA FQLILGDIYR TVSKKAVASE EDRAGAAGVK
201: EGKTINVAAT ADNGGEKKQC CSA
101: KPTTFENIAR WLKELRDHAD ANIRIMLVGN KTDLKDLRAV PTDDAGGYAE AEGLSYIETS ALEAMNVEEA FQLILGDIYR TVSKKAVASE EDRAGAAGVK
201: EGKTINVAAT ADNGGEKKQC CSA
001: MARRPDEEYD YLFKVVLIGD SGVGKSNLLS RFTRNEFCLE SKSTIGVEFA TRTLQVEGRT VKAQIWDTAG QERYRAITSA YYRGALGALL VYDVTKPTTF
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
101: ENVSRWLKEL RDHADSNIVI MLIGNKTDLK HLRAVATEDA QSYAEKEGLS FIETSALEAL NVEKAFQTIL SEVYRIISKK SISSDQTTAN ANIKEGQTID
201: VAATSESNAK KPCCSSS
Arabidopsis Description
RABA2ARas-related protein RABA2a [Source:UniProtKB/Swiss-Prot;Acc:O04486]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.