Factsheet for TraesCS7B01G287900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G297900.1
TraesCS1B01G307400.1
TraesCS1D01G293300.1
TraesCS3A01G348100.1
TraesCS3B01G380000.1
TraesCS3D01G341700.1
TraesCS4A01G180500.1
TraesCS4B01G137300.1
TraesCS4D01G132000.1
TraesCS5A01G151600.1
TraesCS5B01G150200.1
TraesCS5D01G156800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01200.1	TraesCS1A01G297900.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS1B01G307400.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS1D01G293300.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3A01G348100.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3B01G380000.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3D01G341700.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4A01G180500.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4B01G137300.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4D01G132000.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5A01G151600.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5B01G150200.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5D01G156800.1	AT2G38360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G381500.1	Wheat	cytosol	96.43	96.43
HORVU7Hr1G091490.3	Barley	cytosol	86.61	85.09
EER90389	Sorghum	cytosol	70.54	75.6
Os06t0714600-01	Rice	cytosol	75.45	75.11
GSMUA_Achr9P00860_001	Banana	cytosol	70.09	68.26
GSMUA_Achr3P13850_001	Banana	cytosol	66.96	64.1
TraesCS5B01G316300.1	Wheat	cytosol	70.54	63.71
KRH06418	Soybean	cytosol	66.07	60.66
KRH47850	Soybean	cytosol	66.07	60.41
VIT_15s0048g03000.t01	Wine grape	cytosol	63.84	59.83
KRH68938	Soybean	cytosol	62.95	59.75
AT1G01200.1	Thale cress	cytosol	62.95	59.49
PGSC0003DMT400000356	Potato	cytosol	63.84	59.34
KRG97215	Soybean	cytosol	62.5	59.32
CDY15192	Canola	cytosol	62.05	58.65
Bra033277.1-P	Field mustard	cytosol	61.61	58.23
CDX90017	Canola	cytosol	61.61	58.23
Solyc01g096220.2.1	Tomato	plastid	62.95	58.02
TraesCS1B01G152100.1	Wheat	cytosol	55.36	57.41
TraesCS3B01G396200.1	Wheat	cytosol, golgi	54.02	56.02
TraesCS5B01G171900.1	Wheat	cytosol	56.25	55.75
TraesCS5B01G498600.1	Wheat	cytosol, plastid	52.23	54.42
TraesCS1B01G426300.1	Wheat	cytosol	52.23	54.17
TraesCS5B01G182200.1	Wheat	cytosol	52.23	54.17
TraesCS7B01G273300.1	Wheat	plastid	52.23	53.92
TraesCS7B01G200600.1	Wheat	cytosol	51.34	53.24
TraesCS1B01G018900.1	Wheat	cytosol	52.68	52.91
TraesCS3B01G324300.1	Wheat	cytosol, golgi	51.79	52.49
TraesCS5B01G530800.1	Wheat	cytosol	51.79	52.02
TraesCS1B01G150900.1	Wheat	cytosol	49.55	51.15
TraesCS3B01G272300.1	Wheat	cytosol	52.23	33.81

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF345	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS7B01G287900
EnsemblPlants:TraesCS7B01G287900.1	TIGR:cd01868	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:-:524036287..524036961

Molecular Weight (calculated)

24225.6 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.125

Length

224 amino acids

Sequence
(BLAST)

001: MEEDYVFKVV VIGDSGVGKT QLLGRFTRGE FCLDSKSTIG IEFQTRTVDI AGRRVKAQIW DTAGQERYRA VTSAYYRGAL GAMLVYDVTR RDSFAHVARW
101: VAELRAHADK SIVVALVGNK ADLAAAAPGR REVGADEAEA FAEEQGLFFY EASALSGDNV EAAFLGLLEE IHATVSRKPL EAARGNGDGD DDVLVLKGIS
201: LSQELSMMET SAMKTPSRCS SCST

Best Arabidopsis Sequence Match ( AT1G01200.1 )
(BLAST)

001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC

Arabidopsis Description

RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.