Factsheet for TraesCS5B01G171900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G179100.1	Wheat	cytosol	99.11	99.11
TraesCS5A01G176000.1	Wheat	cytosol	99.11	99.11
EER96479	Sorghum	cytosol	86.28	86.28
Zm00001d005504_P001	Maize	cytosol, extracellular	85.4	85.4
VIT_13s0064g01300.t01	Wine grape	cytosol	82.3	82.3
GSMUA_Achr3P11810_001	Banana	cytosol	80.09	80.44
Bra037516.1-P	Field mustard	cytosol	77.43	78.48
CDX86332	Canola	cytosol	77.43	78.48
CDY54519	Canola	cytosol	76.99	78.03
AT5G47960.1	Thale cress	cytosol	76.55	77.58
GSMUA_Achr1P19620_001	Banana	cytosol	79.2	77.49
TraesCS1B01G152100.1	Wheat	cytosol	70.8	74.07
TraesCS7B01G273300.1	Wheat	plastid	58.41	60.83
TraesCS3B01G396200.1	Wheat	cytosol, golgi	57.96	60.65
TraesCS1B01G426300.1	Wheat	cytosol	57.52	60.19
TraesCS5B01G182200.1	Wheat	cytosol	57.08	59.72
TraesCS7B01G200600.1	Wheat	cytosol	56.64	59.26
TraesCS5B01G530800.1	Wheat	cytosol	57.52	58.3
TraesCS3B01G324300.1	Wheat	cytosol, golgi	56.19	57.47
TraesCS1B01G150900.1	Wheat	cytosol	54.87	57.14
TraesCS1B01G018900.1	Wheat	cytosol	56.19	56.95
TraesCS5B01G498600.1	Wheat	cytosol, plastid	53.98	56.74
TraesCS7B01G287900.1	Wheat	cytosol	55.75	56.25
TraesCS5B01G316300.1	Wheat	cytosol	54.42	49.6
TraesCS3B01G272300.1	Wheat	cytosol	57.08	37.28

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF647	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS5B01G171900
EnsemblPlants:TraesCS5B01G171900.1	TIGR:cd01868	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:316378384..316380035

Molecular Weight (calculated)

24897.8 Da

IEP (calculated)

8.180

GRAVY (calculated)

-0.298

Length

226 amino acids

Sequence
(BLAST)

001: MSRGGGYGEM GQKIDYVFKV VLIGDSAVGK SQLLARFARN EFSLDSKATI GVEFQTKTLQ IDNRTVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDMT
101: KRQSFDHMAR WLEELRSHAD KNIVIMLIGN KSDLGSLRAV PTEDAKEFAE RESLFFMETS ALEATNVERA FMTGLEEIYR TVSKKNLVAN DEANSGGNSS
201: LLKGTKVIIP GQEPAPPAKA ACCMSS

Best Arabidopsis Sequence Match ( AT3G12160.1 )
(BLAST)

001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS

Arabidopsis Description

RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.