Factsheet for TraesCS3B01G396200.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G357500.1	Wheat	cytosol	100.0	99.54
TraesCS3A01G364100.1	Wheat	cytosol	99.07	99.07
Os01t0848700-01	Rice	cytosol, plasma membrane	95.37	95.37
TraesCS5B01G498600.1	Wheat	cytosol, plastid	82.41	82.79
TraesCS1B01G150900.1	Wheat	cytosol	71.3	70.97
HORVU3Hr1G085710.1	Barley	cytosol, plastid	99.54	68.47
TraesCS7B01G273300.1	Wheat	plastid	68.06	67.74
TraesCS1B01G426300.1	Wheat	cytosol	67.13	67.13
TraesCS1B01G018900.1	Wheat	cytosol	68.52	66.37
TraesCS5B01G530800.1	Wheat	cytosol	68.52	66.37
TraesCS5B01G182200.1	Wheat	cytosol	66.2	66.2
TraesCS7B01G200600.1	Wheat	cytosol	66.2	66.2
TraesCS3B01G324300.1	Wheat	cytosol, golgi	66.67	65.16
TraesCS1B01G152100.1	Wheat	cytosol	62.96	62.96
TraesCS5B01G171900.1	Wheat	cytosol	60.65	57.96
TraesCS7B01G287900.1	Wheat	cytosol	56.02	54.02
TraesCS5B01G316300.1	Wheat	cytosol	54.63	47.58
TraesCS3B01G272300.1	Wheat	cytosol	63.43	39.6

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF458	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
EnsemblPlantsGene:TraesCS3B01G396200	EnsemblPlants:TraesCS3B01G396200.1	TIGR:cd01868	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:-:625200740..625202701

Molecular Weight (calculated)

23869.2 Da

IEP (calculated)

6.677

GRAVY (calculated)

-0.275

Length

216 amino acids

Sequence
(BLAST)

001: MAHRVDNEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQIEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VFDITKRQTF
101: DNVQRWLREL RDHADANIVV MMVGNKSDLN HLRSVPEEDS QAFSEKEGLS FLETSALEAI NVEKAFHTVL SEIHQIVSKK ALAAQESAAA NGRSMQGTTI
201: NVAEPSANAK GSCCSS

Best Arabidopsis Sequence Match ( AT3G46830.2 )
(BLAST)

001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS

Arabidopsis Description

RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.