Factsheet for GSMUA_Achr1P19620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P11810_001	Banana	cytosol	86.58	88.89
GSMUA_Achr1P16540_001	Banana	cytosol	74.89	86.07
Zm00001d005504_P001	Maize	cytosol, extracellular	79.65	81.42
EER96479	Sorghum	cytosol	79.65	81.42
AT5G47960.1	Thale cress	cytosol	78.36	81.17
CDY54519	Canola	cytosol	78.36	81.17
Bra037516.1-P	Field mustard	cytosol	77.92	80.72
CDX86332	Canola	cytosol	77.92	80.72
VIT_13s0064g01300.t01	Wine grape	cytosol	78.79	80.53
TraesCS5D01G179100.1	Wheat	cytosol	77.92	79.65
TraesCS5A01G176000.1	Wheat	cytosol	77.92	79.65
TraesCS5B01G171900.1	Wheat	cytosol	77.49	79.2
GSMUA_Achr3P01690_001	Banana	cytosol	66.67	70.32
GSMUA_Achr8P18090_001	Banana	cytosol	65.8	69.72
GSMUA_Achr3P21290_001	Banana	cytosol	65.37	68.95
GSMUA_Achr3P15680_001	Banana	plasma membrane	60.61	64.52
GSMUA_Achr9P05610_001	Banana	cytosol	58.44	62.79
GSMUA_Achr4P02540_001	Banana	cytosol	51.52	61.98
GSMUA_Achr5P09130_001	Banana	cytosol	58.01	61.75
GSMUA_Achr8P27780_001	Banana	cytosol	48.05	61.67
GSMUA_Achr6P14930_001	Banana	cytosol	45.45	61.4
GSMUA_Achr1P11940_001	Banana	cytosol	56.71	60.65
GSMUA_Achr3P15540_001	Banana	cytosol	56.71	60.65
GSMUA_Achr4P02760_001	Banana	cytosol	49.78	60.53
GSMUA_Achr9P03770_001	Banana	cytosol	48.92	60.43
GSMUA_Achr8P27180_001	Banana	cytosol	56.28	60.19
GSMUA_Achr7P26890_001	Banana	cytosol	48.48	59.89
GSMUA_Achr5P28770_001	Banana	cytosol	55.84	59.45
GSMUA_Achr6P18430_001	Banana	cytosol	57.14	58.67
GSMUA_Achr6P31790_001	Banana	cytosol	41.99	58.43
GSMUA_Achr1P04780_001	Banana	cytosol	49.78	57.5
GSMUA_Achr8P02230_001	Banana	plasma membrane	53.68	57.41
GSMUA_Achr2P05630_001	Banana	cytosol	53.25	57.21
GSMUA_Achr6P28910_001	Banana	cytosol	53.68	57.14
GSMUA_Achr9P00860_001	Banana	cytosol	55.84	56.09
GSMUA_Achr7P14790_001	Banana	cytosol	46.32	55.73
GSMUA_Achr3P13850_001	Banana	cytosol	56.28	55.56
GSMUA_Achr7P10970_001	Banana	cytosol	47.62	43.48

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G19620_001	EnsemblPlants:GSMUA_Achr1P19620_001	EnsemblPlants:GSMUA_Achr1T19620_001
UniProt:M0S1C0	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF863	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294F1EF	SEG:seg

Description

Ras-related protein RGP1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G19620_001]

Coordinates

chr1:+:14690131..14693995

Molecular Weight (calculated)

25531.2 Da

IEP (calculated)

7.568

GRAVY (calculated)

-0.289

Length

231 amino acids

Sequence
(BLAST)

001: MSLGSSSSRN HYGEFNQKID YVFKVVLIGD SAVGKSQLLA RFSRNEFSID SKATIGVEFQ TRTITIDHKT IKAQIWDTAG QERYRAVTSA YYRGAVGAML
101: VYDITKRQSF DHMTRWLEEL RGHTDRNIVI MLIGNKSDLG TLRAVPIDDA KEFAQRENLF FMETSALEAT NVESAFLTVL TDIYRITSKK SLVANDGSDS
201: TGNSSLLKGT EIVVPGQEPS SGTKSTCCGS T

Best Arabidopsis Sequence Match ( AT3G12160.1 )
(BLAST)

001: MSNLYGDYNQ KIDYVFKVVL IGDSAVGKTQ LLARFARNEF SVDSKATIGV EFQTKTLVID NKTVKAQIWD TAGQERYRAV TSAYYRGAVG AMLVYDMTKR
101: QSFDHMAKWL EELRGHADKN IVIMLIGNKC DLGSLRAVPT EDAQEFAQRE NLFFMETSAL EATNVETAFL TILTEIYRII SKKSLTADDD DADGNSSLLK
201: GTRIIIPSEQ ESGKRGGCCG KS

Arabidopsis Description

RABA4DRABA4D [Source:UniProtKB/TrEMBL;Acc:A0A178V6M2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.