Factsheet for GSMUA_Achr1P16540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P11810_001	Banana	cytosol	85.07	76.0
GSMUA_Achr1P19620_001	Banana	cytosol	86.07	74.89
GSMUA_Achr9P03770_001	Banana	cytosol	60.7	65.24
GSMUA_Achr3P01690_001	Banana	cytosol	69.15	63.47
GSMUA_Achr7P26890_001	Banana	cytosol	58.71	63.1
GSMUA_Achr8P18090_001	Banana	cytosol	68.16	62.84
GSMUA_Achr6P14930_001	Banana	cytosol	52.74	61.99
GSMUA_Achr3P21290_001	Banana	cytosol	67.16	61.64
GSMUA_Achr8P27780_001	Banana	cytosol	53.73	60.0
GSMUA_Achr3P15680_001	Banana	plasma membrane	60.7	56.22
GSMUA_Achr5P28770_001	Banana	cytosol	59.7	55.3
GSMUA_Achr4P02540_001	Banana	cytosol	52.24	54.69
GSMUA_Achr9P05610_001	Banana	cytosol	58.21	54.42
GSMUA_Achr8P02230_001	Banana	plasma membrane	58.21	54.17
GSMUA_Achr1P11940_001	Banana	cytosol	58.21	54.17
GSMUA_Achr5P09130_001	Banana	cytosol	58.21	53.92
GSMUA_Achr6P18430_001	Banana	cytosol	59.7	53.33
GSMUA_Achr4P02760_001	Banana	cytosol	50.25	53.16
GSMUA_Achr3P15540_001	Banana	cytosol	56.22	52.31
GSMUA_Achr2P05630_001	Banana	cytosol	54.73	51.16
GSMUA_Achr6P28910_001	Banana	cytosol	55.22	51.15
GSMUA_Achr8P27180_001	Banana	cytosol	54.73	50.93
GSMUA_Achr9P00860_001	Banana	cytosol	57.21	50.0
GSMUA_Achr6P31790_001	Banana	cytosol	40.8	49.4
GSMUA_Achr3P13850_001	Banana	cytosol	56.72	48.72
GSMUA_Achr1P04780_001	Banana	cytosol	48.26	48.5
GSMUA_Achr7P14790_001	Banana	cytosol	45.77	47.92
GSMUA_Achr7P10970_001	Banana	cytosol	47.76	37.94

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr1G16540_001	EnsemblPlants:GSMUA_Achr1P16540_001	EnsemblPlants:GSMUA_Achr1T16540_001
UniProt:M0S0G2	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF863	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000294ECE6	:	:	:

Description

Ras-related protein RGP1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G16540_001]

Coordinates

chr1:+:12340914..12343878

Molecular Weight (calculated)

22198.1 Da

IEP (calculated)

8.651

GRAVY (calculated)

-0.327

Length

201 amino acids

Sequence
(BLAST)

001: MSSGSRNYYG EFNQKIDYVF KVVLIGDSAV GKSQLLARFS RNEFSVDSKA TIGVEFQTRT LTIDSKTIKA QIWDTAGQER YRAVTSAYYR GAVGAMLVYD
101: ITKRQSFDHV ARWLEELRGH ADRNIRESLF FMETSALEST NVESAFQTVL TEIHRIVSKK SLAANDEAQS AGNSSLLKGT SIVVPGQDPP SANKATCCSS
201: S

Best Arabidopsis Sequence Match ( AT1G07410.1 )
(BLAST)

001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST

Arabidopsis Description

RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.