Factsheet for GSMUA_Achr7P26890_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03770_001	Banana	cytosol	91.98	91.98
GSMUA_Achr6P14930_001	Banana	cytosol	74.33	81.29
GSMUA_Achr8P02230_001	Banana	plasma membrane	90.91	78.7
GSMUA_Achr5P28770_001	Banana	cytosol	89.3	76.96
KRH73103	Soybean	cytosol, endoplasmic reticulum, nucleus	82.35	70.97
KRH15036	Soybean	cytosol, nucleus	81.82	70.83
Solyc03g079900.2.1	Tomato	cytosol	80.75	70.23
PGSC0003DMT400055848	Potato	cytosol	80.21	70.09
PGSC0003DMT400069776	Potato	cytosol	80.21	69.77
KRG97821	Soybean	cytosol, endoplasmic reticulum, nucleus	80.75	69.59
Solyc05g052900.2.1	Tomato	cytosol	79.14	68.84
VIT_13s0019g02470.t01	Wine grape	cytosol	82.35	63.9
GSMUA_Achr8P27780_001	Banana	cytosol	59.36	61.67
GSMUA_Achr2P05630_001	Banana	cytosol	70.59	61.4
GSMUA_Achr6P28910_001	Banana	cytosol	68.98	59.45
GSMUA_Achr6P18430_001	Banana	cytosol	71.12	59.11
GSMUA_Achr1P16540_001	Banana	cytosol	63.1	58.71
GSMUA_Achr3P15680_001	Banana	plasma membrane	66.31	57.14
GSMUA_Achr9P05610_001	Banana	cytosol	65.24	56.74
GSMUA_Achr5P09130_001	Banana	cytosol	64.71	55.76
GSMUA_Achr3P15540_001	Banana	cytosol	63.1	54.63
GSMUA_Achr1P11940_001	Banana	cytosol	62.57	54.17
GSMUA_Achr8P27180_001	Banana	cytosol	62.03	53.7
GSMUA_Achr6P31790_001	Banana	cytosol	46.52	52.41
GSMUA_Achr3P01690_001	Banana	cytosol	60.43	51.6
GSMUA_Achr4P02760_001	Banana	cytosol	52.41	51.58
GSMUA_Achr4P02540_001	Banana	cytosol	52.94	51.56
GSMUA_Achr8P18090_001	Banana	cytosol	59.89	51.38
GSMUA_Achr3P21290_001	Banana	cytosol	59.89	51.14
GSMUA_Achr3P11810_001	Banana	cytosol	60.96	50.67
GSMUA_Achr1P04780_001	Banana	cytosol	52.94	49.5
GSMUA_Achr1P19620_001	Banana	cytosol	59.89	48.48
GSMUA_Achr7P14790_001	Banana	cytosol	49.2	47.92
GSMUA_Achr3P13850_001	Banana	cytosol	57.75	46.15
GSMUA_Achr9P00860_001	Banana	cytosol	53.48	43.48
GSMUA_Achr7P10970_001	Banana	cytosol	51.87	38.34

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr7G26890_001	EnsemblPlants:GSMUA_Achr7P26890_001	EnsemblPlants:GSMUA_Achr7T26890_001
UniProt:M0TL25	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF495	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00029572AC	SEG:seg	:

Description

Ras-related protein Rab11C [Source:GMGC_GENE;Acc:GSMUA_Achr7G26890_001]

Coordinates

chr7:-:28051117..28053860

Molecular Weight (calculated)

20754.7 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.236

Length

187 amino acids

Sequence
(BLAST)

001: MAHRVDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLD SKSTIGVEFA TKTIQIEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKQKTF
101: DNVQRWLREL RDHADSNIGL SFLETSALES LNVEKAFQTI LMEIYHIINK KALAAKEAAR TAGPIAQGTN INVSDPAGGS KTACCSR

Best Arabidopsis Sequence Match ( AT1G07410.1 )
(BLAST)

001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST

Arabidopsis Description

RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.