Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g052900.2.1 | Tomato | cytosol | 97.21 | 97.21 |
| PGSC0003DMT400055848 | Potato | cytosol | 90.7 | 91.12 |
| KRH15036 | Soybean | cytosol, nucleus | 85.58 | 85.19 |
| KRG97821 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.12 | 84.33 |
| KRH73103 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.12 | 84.33 |
| PGSC0003DMT400078200 | Potato | cytosol | 84.19 | 84.19 |
| HORVU5Hr1G114250.1 | Barley | cytosol, plasma membrane | 83.72 | 83.72 |
| PGSC0003DMT400053686 | Potato | cytosol | 83.72 | 83.33 |
| Os03t0823700-01 | Rice | plasma membrane | 83.26 | 83.26 |
| GSMUA_Achr6P14930_001 | Banana | cytosol | 66.05 | 83.04 |
| Zm00001d034675_P002 | Maize | cytosol | 82.79 | 82.79 |
| KXG37238 | Sorghum | cytosol | 82.33 | 82.33 |
| TraesCS5D01G498600.1 | Wheat | cytosol | 81.4 | 81.4 |
| TraesCS5B01G498600.1 | Wheat | cytosol, plastid | 81.4 | 81.4 |
| TraesCS5A01G485100.1 | Wheat | cytosol, golgi | 81.4 | 81.4 |
| GSMUA_Achr9P03770_001 | Banana | cytosol | 70.7 | 81.28 |
| GSMUA_Achr7P26890_001 | Banana | cytosol | 69.77 | 80.21 |
| GSMUA_Achr8P02230_001 | Banana | plasma membrane | 78.6 | 78.24 |
| VIT_13s0019g02470.t01 | Wine grape | cytosol | 87.44 | 78.01 |
| GSMUA_Achr5P28770_001 | Banana | cytosol | 77.21 | 76.5 |
| PGSC0003DMT400064102 | Potato | cytosol | 73.02 | 73.36 |
| PGSC0003DMT400024319 | Potato | cytosol | 68.37 | 67.74 |
| PGSC0003DMT400020208 | Potato | cytosol | 67.44 | 66.82 |
| PGSC0003DMT400058784 | Potato | cytosol | 65.58 | 65.58 |
| PGSC0003DMT400033395 | Potato | cytosol | 65.58 | 65.28 |
| PGSC0003DMT400073077 | Potato | cytosol | 64.65 | 64.06 |
| PGSC0003DMT400039780 | Potato | cytosol, mitochondrion | 64.65 | 64.06 |
| PGSC0003DMT400041813 | Potato | cytosol | 64.19 | 61.61 |
| PGSC0003DMT400045950 | Potato | cytosol | 71.16 | 60.0 |
| PGSC0003DMT400060649 | Potato | cytosol | 61.86 | 59.91 |
| PGSC0003DMT400033664 | Potato | cytosol | 61.4 | 58.93 |
| PGSC0003DMT400065028 | Potato | cytosol | 60.93 | 57.96 |
| PGSC0003DMT400021064 | Potato | cytosol | 60.47 | 57.52 |
| PGSC0003DMT400000356 | Potato | cytosol | 57.67 | 51.45 |
Protein Annotations
| EntrezGene:102592707 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | UniProt:M1CL50 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | EnsemblPlantsGene:PGSC0003DMG400027134 | PGSC:PGSC0003DMG400027134 | EnsemblPlants:PGSC0003DMT400069776 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI000295D5FB |
| RefSeq:XP_006355682.1 | SEG:seg | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027134]
Coordinates
chr5:+:48189416..48191718
Molecular Weight (calculated)
23950.5 Da
IEP (calculated)
6.783
GRAVY (calculated)
-0.237
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYKVDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVTRWLREL RDHADSNIVI MLAGNKSDLN HLRSIPELDA RGLAEKEGLS FLETSALEAY NVEKAFQTIL LDIYEIVSRK ALAAQEAAAA IPGQGTAINV
201: GEYVGNNNKR PCCSN
101: ENVTRWLREL RDHADSNIVI MLAGNKSDLN HLRSIPELDA RGLAEKEGLS FLETSALEAY NVEKAFQTIL LDIYEIVSRK ALAAQEAAAA IPGQGTAINV
201: GEYVGNNNKR PCCSN
001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
Arabidopsis Description
RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.