Factsheet for Zm00001d034675_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37238	Sorghum	cytosol	98.14	98.14
HORVU5Hr1G114250.1	Barley	cytosol, plasma membrane	94.88	94.88
Os03t0823700-01	Rice	plasma membrane	94.42	94.42
TraesCS5A01G485100.1	Wheat	cytosol, golgi	93.02	93.02
TraesCS5B01G498600.1	Wheat	cytosol, plastid	92.56	92.56
TraesCS5D01G498600.1	Wheat	cytosol	92.56	92.56
GSMUA_Achr6P14930_001	Banana	cytosol	67.91	85.38
KRH15036	Soybean	cytosol, nucleus	83.72	83.33
Solyc03g079900.2.1	Tomato	cytosol	83.26	83.26
Solyc05g052900.2.1	Tomato	cytosol	83.26	83.26
PGSC0003DMT400055848	Potato	cytosol	82.79	83.18
PGSC0003DMT400069776	Potato	cytosol	82.79	82.79
KRH73103	Soybean	cytosol, endoplasmic reticulum, nucleus	82.79	82.03
KRG97821	Soybean	cytosol, endoplasmic reticulum, nucleus	82.33	81.57
VIT_13s0019g02470.t01	Wine grape	cytosol	84.65	75.52
Zm00001d046313_P001	Maize	plastid	69.77	69.12
Zm00001d005495_P001	Maize	extracellular, mitochondrion, plasma membrane	71.16	68.61
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	67.44	67.13
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	67.44	67.13
Zm00001d014278_P001	Maize	extracellular, plasma membrane	63.72	63.13
Zm00001d043935_P001	Maize	cytosol	63.26	61.82
Zm00001d048222_P001	Maize	extracellular, plasma membrane	60.93	60.37
Zm00001d028002_P001	Maize	mitochondrion	60.47	59.91
Zm00001d034802_P001	Maize	cytosol	64.65	59.4
Zm00001d034803_P001	Maize	cytosol	64.65	59.4
Zm00001d005504_P001	Maize	cytosol, extracellular	59.53	56.64
Zm00001d037004_P002	Maize	cytosol	70.23	52.61
Zm00001d021246_P002	Maize	cytosol	49.77	43.15

Protein Annotations

EntrezGene:100216670	MapMan:22.8.1.1	Gene3D:3.40.50.300	UniProt:B4FJ62	EMBL:BT037150	EMBL:BT068867
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	ProteinID:ONM10973.1	ProteinID:ONM10974.1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF495	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI00017B735E	EnsemblPlantsGene:Zm00001d034675	EnsemblPlants:Zm00001d034675_P002	EnsemblPlants:Zm00001d034675_T002	:	:

Description

Ras-related protein RABA2c

Coordinates

chr1:-:299603375..299608703

Molecular Weight (calculated)

23680.1 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.304

Length

215 amino acids

Sequence
(BLAST)

001: MAHRMDNEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKKQTF
101: ENIQRWLREL RDHADSNIVI MMVGNKSDLN HLRSVAEEDG QALAEKEGLS FLETSALEAL NVEKAFQTVL SDIHQIISKK ALAAQEAAGS GPPGQGTTIN
201: IADPSANTKR GCCSS

Best Arabidopsis Sequence Match ( AT1G07410.1 )
(BLAST)

001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST

Arabidopsis Description

RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.