Factsheet for Zm00001d037004_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89913	Sorghum	cytosol	75.61	100.0
Zm00001d046313_P001	Maize	plastid	74.56	98.62
Os06t0551400-01	Rice	cytosol, golgi, plasma membrane, plastid	74.22	98.16
TraesCS7A01G354400.1	Wheat	golgi	72.82	96.31
TraesCS7D01G368300.1	Wheat	cytosol	72.82	96.31
TraesCS7B01G273300.1	Wheat	plastid	72.13	95.39
HORVU7Hr1G089120.1	Barley	cytosol	72.82	84.62
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	59.23	78.7
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	58.88	78.24
Zm00001d043935_P001	Maize	cytosol	54.7	71.36
Zm00001d034675_P002	Maize	cytosol	52.61	70.23
Zm00001d005495_P001	Maize	extracellular, mitochondrion, plasma membrane	50.17	64.57
Zm00001d014278_P001	Maize	extracellular, plasma membrane	45.64	60.37
Zm00001d034802_P001	Maize	cytosol	49.13	60.26
Zm00001d034803_P001	Maize	cytosol	49.13	60.26
Zm00001d048222_P001	Maize	extracellular, plasma membrane	44.6	58.99
Zm00001d005504_P001	Maize	cytosol, extracellular	46.34	58.85
Zm00001d028002_P001	Maize	mitochondrion	44.25	58.53
Zm00001d021246_P002	Maize	cytosol	39.02	45.16

Protein Annotations

EntrezGene:100194331	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6LT87	ProteinID:AQK82630.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF544
SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI000844C456	EnsemblPlantsGene:Zm00001d037004	EnsemblPlants:Zm00001d037004_P002	EnsemblPlants:Zm00001d037004_T002	:

Description

Ras-related protein RABA1d

Coordinates

chr6:+:108805580..108813472

Molecular Weight (calculated)

31568.9 Da

IEP (calculated)

5.024

GRAVY (calculated)

-0.478

Length

287 amino acids

Sequence
(BLAST)

001: MAAGYRAEDD YDYLFKVVLI GDSGVGKSNL LSRFTRNEFS LESKSTIGVE FATRSLQVDG KVVKAQIWDT AGQEREKNIM GELNSKGIKG ELDRGNCWRG
101: VEIGEESYGG RYLNMNGRYE YGDFGGGTVG VSPLESERNG TGSDRYRAIT SAYYRGAVGA LLVYDVTRHS TFENVERWLK ELRDHTDPNI VVMLVGNKSD
201: LRHLVAVQTD EGKAFAERES LYFMETSALE STNVENAFAE VLTQIYRIVS KRAVEAGEDA ASGPGKGEKI NIKDDVSAVK KGGCCSS

Best Arabidopsis Sequence Match ( AT1G06400.1 )
(BLAST)

001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN

Arabidopsis Description

RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.