Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046313_P001 | Maize | plastid | 98.62 | 98.62 |
| Os06t0551400-01 | Rice | cytosol, golgi, plasma membrane, plastid | 98.16 | 98.16 |
| TraesCS7D01G368300.1 | Wheat | cytosol | 96.31 | 96.31 |
| TraesCS7A01G354400.1 | Wheat | golgi | 96.31 | 96.31 |
| TraesCS7B01G273300.1 | Wheat | plastid | 95.39 | 95.39 |
| HORVU7Hr1G089120.1 | Barley | cytosol | 96.31 | 84.62 |
| EES19812 | Sorghum | cytosol | 83.87 | 82.73 |
| OQU89311 | Sorghum | cytosol | 81.11 | 81.48 |
| EES19950 | Sorghum | cytosol | 79.26 | 79.63 |
| Zm00001d037004_P002 | Maize | cytosol | 100.0 | 75.61 |
| OQU87300 | Sorghum | cytosol | 72.35 | 71.69 |
| KXG37238 | Sorghum | cytosol | 68.66 | 69.3 |
| OQU77196 | Sorghum | cytosol | 67.74 | 66.82 |
| EER98344 | Sorghum | cytosol | 67.28 | 65.47 |
| EES17935 | Sorghum | cytosol | 64.98 | 64.98 |
| OQU91938 | Sorghum | cytosol | 59.91 | 59.91 |
| EER90540 | Sorghum | cytosol | 64.98 | 59.75 |
| EER92725 | Sorghum | cytosol | 58.99 | 58.99 |
| EER96479 | Sorghum | cytosol | 61.29 | 58.85 |
| EER90389 | Sorghum | cytosol | 46.08 | 47.85 |
| EER97073 | Sorghum | cytosol | 53.92 | 45.7 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:8061947 | UniProt:C5Z487 | EnsemblPlants:EER89913 | ProteinID:EER89913 |
| ProteinID:EER89913.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF544 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | EnsemblPlantsGene:SORBI_3010G163600 |
| SUPFAM:SSF52540 | unigene:Sbi.16983 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI00017B71C7 |
| RefSeq:XP_002438546.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:48194404..48199431
Molecular Weight (calculated)
23966.2 Da
IEP (calculated)
5.424
GRAVY (calculated)
-0.306
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGYRAEDD YDYLFKVVLI GDSGVGKSNL LSRFTRNEFS LESKSTIGVE FATRSLQVDG KVVKAQIWDT AGQERYRAIT SAYYRGAVGA LLVYDVTRHS
101: TFENVERWLK ELRDHTDPNI VVMLVGNKSD LRHLVAVQTD EGKAFAERES LYFMETSALE STNVENAFAE VLTQIYRIVS KRAVEAGEDA ASGPGKGEKI
201: NIKDDVSAVK KGGCCSS
101: TFENVERWLK ELRDHTDPNI VVMLVGNKSD LRHLVAVQTD EGKAFAERES LYFMETSALE STNVENAFAE VLTQIYRIVS KRAVEAGEDA ASGPGKGEKI
201: NIKDDVSAVK KGGCCSS
001: MAGYRADDDY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSLNVNEK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN
Arabidopsis Description
RABA1DRABA1d [Source:UniProtKB/TrEMBL;Acc:A0A178V3A0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.