Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 97.7 | 97.7 |
| Os10t0377400-01 | Rice | cytosol | 95.85 | 96.3 |
| TraesCS1D01G136900.1 | Wheat | cytosol | 94.01 | 94.44 |
| TraesCS1B01G152100.1 | Wheat | cytosol | 94.01 | 94.44 |
| TraesCS1A01G131500.2 | Wheat | cytosol | 94.01 | 94.44 |
| EER92725 | Sorghum | cytosol | 91.71 | 91.71 |
| GSMUA_Achr8P18090_001 | Banana | cytosol | 83.87 | 83.49 |
| GSMUA_Achr3P01690_001 | Banana | cytosol | 83.41 | 82.65 |
| GSMUA_Achr3P21290_001 | Banana | cytosol | 83.41 | 82.65 |
| KRH31313 | Soybean | endoplasmic reticulum | 82.95 | 80.72 |
| Solyc11g010100.1.1 | Tomato | cytosol | 82.95 | 80.36 |
| PGSC0003DMT400041813 | Potato | cytosol | 82.95 | 80.36 |
| KRG97554 | Soybean | cytosol, endoplasmic reticulum | 82.03 | 79.82 |
| VIT_07s0191g00030.t01 | Wine grape | cytosol | 82.95 | 79.65 |
| Solyc04g012180.2.1 | Tomato | cytosol, unclear | 79.26 | 77.48 |
| PGSC0003DMT400060649 | Potato | cytosol | 79.26 | 77.48 |
| CDX69843 | Canola | cytosol | 78.8 | 76.68 |
| AT5G65270.1 | Thale cress | cytosol | 79.72 | 76.55 |
| CDX96994 | Canola | cytosol | 78.34 | 76.23 |
| Bra009040.1-P | Field mustard | cytosol | 78.34 | 76.23 |
| CDY18682 | Canola | cytosol | 78.34 | 75.56 |
| Bra037810.1-P | Field mustard | cytosol | 78.34 | 75.56 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 79.72 | 75.55 |
| CDX81274 | Canola | cytosol | 77.88 | 74.45 |
| Bra011818.1-P | Field mustard | cytosol | 76.04 | 73.99 |
| CDY69836 | Canola | cytosol | 76.04 | 73.66 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 92.63 | 73.63 |
| EER96479 | Sorghum | cytosol | 75.12 | 72.12 |
| AT4G39990.1 | Thale cress | cytosol | 74.19 | 71.88 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 76.5 | 70.04 |
| KXG37238 | Sorghum | cytosol | 62.67 | 63.26 |
| EES17935 | Sorghum | cytosol | 60.37 | 60.37 |
| CDX69367 | Canola | cytosol | 51.15 | 60.33 |
| EER89913 | Sorghum | cytosol | 59.91 | 59.91 |
| OQU89311 | Sorghum | cytosol | 59.45 | 59.72 |
| EES19950 | Sorghum | cytosol | 58.99 | 59.26 |
| EES19812 | Sorghum | cytosol | 59.45 | 58.64 |
| OQU77196 | Sorghum | cytosol | 58.53 | 57.73 |
| EER98344 | Sorghum | cytosol | 58.99 | 57.4 |
| OQU87300 | Sorghum | cytosol | 55.3 | 54.79 |
| EER90540 | Sorghum | cytosol | 57.6 | 52.97 |
| EER90389 | Sorghum | cytosol | 50.23 | 52.15 |
| EER97073 | Sorghum | cytosol | 56.22 | 47.66 |
| CDX69369 | Canola | cytosol | 74.65 | 39.71 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:8155288 | UniProt:C6JRW3 | ProteinID:EES20260.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0016787 |
| ProteinID:KXG19003.1 | EnsemblPlants:OQU91938 | ProteinID:OQU91938 | ProteinID:OQU91938.1 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF647 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | EnsemblPlantsGene:SORBI_3001G261597 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI0001AFF815 | RefSeq:XP_002489255.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:40607303..40615503
Molecular Weight (calculated)
23927.6 Da
IEP (calculated)
8.656
GRAVY (calculated)
-0.270
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGGDKVDY VFKVVLIGDS AVGKSQILAR FARNEFSLDS KATIGVEFQT RTLVIDHKSV KAQIWDTAGQ ERYRAVTSAY YRGALGALLV YDITKRQSFD
101: HIPRWLEELR GHADKNIVIM LVGNKSDLEE ERAVSSEDAK EFAEKENLFF LETSALQATN VENAFQTVLT EIFKIHSKKN MAADPKANGA APSLAGKKVI
201: VPGPAQEIPK SKCCSSM
101: HIPRWLEELR GHADKNIVIM LVGNKSDLEE ERAVSSEDAK EFAEKENLFF LETSALQATN VENAFQTVLT EIFKIHSKKN MAADPKANGA APSLAGKKVI
201: VPGPAQEIPK SKCCSSM
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Arabidopsis Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.