CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037810.1-P	Field mustard	cytosol	100.0	100.0
CDX81274	Canola	cytosol	99.56	98.68
AT5G65270.1	Thale cress	cytosol	95.11	94.69
CDX69843	Canola	cytosol	86.67	87.44
CDX96994	Canola	cytosol	86.22	87.0
CDY69836	Canola	cytosol	82.67	83.04
KRH59301	Soybean	cytosol, endoplasmic reticulum	83.11	81.66
Zm00001d014278_P001	Maize	extracellular, plasma membrane	76.44	79.26
GSMUA_Achr3P01690_001	Banana	cytosol	76.89	79.0
TraesCS1D01G136900.1	Wheat	cytosol	75.56	78.7
TraesCS1B01G152100.1	Wheat	cytosol	75.56	78.7
TraesCS1A01G131500.2	Wheat	cytosol	75.56	78.7
Os10t0377400-01	Rice	cytosol	75.56	78.7
GSMUA_Achr3P21290_001	Banana	cytosol	76.44	78.54
OQU91938	Sorghum	cytosol	75.56	78.34
EER92725	Sorghum	cytosol	75.11	77.88
GSMUA_Achr8P18090_001	Banana	cytosol	75.11	77.52
Zm00001d048222_P001	Maize	extracellular, plasma membrane	74.67	77.42
Zm00001d028002_P001	Maize	mitochondrion	74.22	76.96
KRH43151	Soybean	cytosol, endoplasmic reticulum	78.67	74.68
CDX73833	Canola	cytosol	68.0	69.23
CDY00758	Canola	cytosol	68.0	69.23
CDX69367	Canola	cytosol	56.0	68.48
CDY52622	Canola	cytosol	67.56	68.47
CDY50568	Canola	cytosol	67.56	68.47
CDX86332	Canola	cytosol	67.56	68.16
CDY54519	Canola	cytosol	67.11	67.71
CDY42133	Canola	cytosol	66.22	67.12
CDY08447	Canola	cytosol	66.22	67.12
HORVU1Hr1G034400.4	Barley	plasma membrane	74.22	61.17
CDY06703	Canola	cytosol	57.78	60.19
CDY33014	Canola	cytosol	57.78	59.91
CDY06256	Canola	cytosol	56.89	59.81
CDX99430	Canola	cytosol	56.89	59.81
CDY09919	Canola	cytosol	56.89	59.81
CDY64916	Canola	cytosol	56.89	59.53
CDY62557	Canola	cytosol	56.89	59.53
CDY71720	Canola	cytosol	56.89	58.99
CDX96799	Canola	cytosol	56.44	58.8
CDY32661	Canola	cytosol	56.44	58.53
CDY02867	Canola	cytosol	56.44	58.53
CDX87774	Canola	cytosol	56.0	58.33
CDX90160	Canola	cytosol	55.56	58.14
CDY50888	Canola	cytosol	55.56	57.6
CDY35757	Canola	cytosol	55.56	57.34
CDX93495	Canola	cytosol	55.11	57.14
CDY35128	Canola	cytosol	54.67	56.94
CDX94631	Canola	cytosol	55.11	56.88
CDY15659	Canola	cytosol	55.11	56.88
CDY34094	Canola	cytosol	55.11	56.88
CDY30818	Canola	cytosol	55.11	56.88
CDY40023	Canola	cytosol	54.22	56.48
CDY20100	Canola	cytosol	54.67	56.42
CDX82451	Canola	cytosol	54.67	56.42
CDY06210	Canola	cytosol	55.56	56.05
CDY09976	Canola	cytosol	55.11	55.61
CDX75804	Canola	cytosol	53.78	55.5
CDY01540	Canola	cytosol	53.33	55.3
CDX76522	Canola	cytosol	53.33	55.3
CDY55638	Canola	cytosol	53.33	55.3
CDX79548	Canola	cytosol	47.11	53.81
CDX90017	Canola	cytosol	56.44	53.59
CDY15192	Canola	cytosol	56.44	53.59
CDX80299	Canola	cytosol	58.22	50.78
CDX86101	Canola	cytosol	57.33	50.39
CDY60884	Canola	cytosol	49.78	50.22
CDX81790	Canola	plastid	55.56	46.82
CDX99094	Canola	cytosol	57.33	44.95
CDX69369	Canola	cytosol	80.44	44.36

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078G108	UniProt:A0A078G108	EnsemblPlants:CDY18682	ProteinID:CDY18682
ProteinID:CDY18682.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488
GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00005759001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF647	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI0002541B3D	SEG:seg	:	:	:	:

Description

BnaA09g07130DBnaA09g07130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G108]

Coordinates

chrLK032087:-:501762..503372

Molecular Weight (calculated)

24724.3 Da

IEP (calculated)

5.727

GRAVY (calculated)

-0.240

Length

225 amino acids

Sequence
(BLAST)

001: MASGGGGGYG DPSQKIDYVF KVVLIGDSAV GKSQILARYA RDEFSLDSKA TIGVEFQTRT LVIDHKSVKA QIWDTAGQER YRAVTSAYYR GAVGAMLVYD
101: ITRRQTFDHI PRWLEELRAH ADKNIVIILI GNKSDLEDQR AIPTEDAKEF AEKEGLFFLE TSAFNATNVE SAFSTVLNEI FNIVNKKSLA VSEEEQHGSL
201: AGKKIDIVPG PGQVIPAKSN MCCNS

Best Arabidopsis Sequence Match ( AT5G65270.1 )
(BLAST)

001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS

Arabidopsis Description

RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.