Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026016.1-P | Field mustard | cytosol | 98.61 | 98.61 |
| AT1G16920.1 | Thale cress | cytosol | 97.69 | 97.69 |
| CDY40023 | Canola | cytosol | 97.69 | 97.69 |
| CDX96799 | Canola | cytosol | 95.37 | 95.37 |
| KRH27364 | Soybean | endoplasmic reticulum | 87.96 | 87.56 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 87.5 | 87.1 |
| GSMUA_Achr9P05610_001 | Banana | cytosol | 84.26 | 84.65 |
| GSMUA_Achr4P02540_001 | Banana | cytosol | 75.0 | 84.38 |
| GSMUA_Achr3P15680_001 | Banana | plasma membrane | 84.72 | 84.33 |
| GSMUA_Achr8P27780_001 | Banana | cytosol | 68.98 | 82.78 |
| CDX99430 | Canola | cytosol | 81.94 | 82.71 |
| GSMUA_Achr6P31790_001 | Banana | cytosol | 62.96 | 81.93 |
| CDY62557 | Canola | cytosol | 81.48 | 81.86 |
| CDY64916 | Canola | cytosol | 81.48 | 81.86 |
| TraesCS3D01G289400.1 | Wheat | cytosol | 82.41 | 80.54 |
| TraesCS3A01G289600.1 | Wheat | cytosol | 81.94 | 80.09 |
| TraesCS3B01G324300.1 | Wheat | cytosol, golgi | 81.94 | 80.09 |
| EES19812 | Sorghum | cytosol | 81.48 | 80.0 |
| CDX87774 | Canola | cytosol | 79.63 | 79.63 |
| CDX81790 | Canola | plastid | 96.76 | 78.28 |
| VIT_19s0014g01160.t01 | Wine grape | extracellular | 88.89 | 76.19 |
| CDX75804 | Canola | cytosol | 75.0 | 74.31 |
| CDX82451 | Canola | cytosol | 75.0 | 74.31 |
| CDX79548 | Canola | cytosol | 67.13 | 73.6 |
| CDY06210 | Canola | cytosol | 75.93 | 73.54 |
| CDY09976 | Canola | cytosol | 75.46 | 73.09 |
| CDX90160 | Canola | cytosol | 72.69 | 73.02 |
| CDY20100 | Canola | cytosol | 73.61 | 72.94 |
| CDY34094 | Canola | cytosol | 73.15 | 72.48 |
| CDY30818 | Canola | cytosol | 73.15 | 72.48 |
| CDY35757 | Canola | cytosol | 72.69 | 72.02 |
| CDX94631 | Canola | cytosol | 72.22 | 71.56 |
| CDY15659 | Canola | cytosol | 72.22 | 71.56 |
| CDX76522 | Canola | cytosol | 70.37 | 70.05 |
| CDY50888 | Canola | cytosol | 69.91 | 69.59 |
| CDY55638 | Canola | cytosol | 69.91 | 69.59 |
| CDY01540 | Canola | cytosol | 69.91 | 69.59 |
| CDY32661 | Canola | cytosol | 69.44 | 69.12 |
| CDY33014 | Canola | cytosol | 69.44 | 69.12 |
| CDY02867 | Canola | cytosol | 69.44 | 69.12 |
| CDY09919 | Canola | cytosol | 68.06 | 68.69 |
| CDY06256 | Canola | cytosol | 68.06 | 68.69 |
| CDX93495 | Canola | cytosol | 68.98 | 68.66 |
| CDY06703 | Canola | cytosol | 68.06 | 68.06 |
| CDY71720 | Canola | cytosol | 67.13 | 66.82 |
| CDY60884 | Canola | cytosol | 64.81 | 62.78 |
| HORVU3Hr1G071740.1 | Barley | plastid | 82.41 | 62.24 |
| CDY00758 | Canola | cytosol | 60.19 | 58.82 |
| CDX73833 | Canola | cytosol | 60.19 | 58.82 |
| CDY54519 | Canola | cytosol | 60.65 | 58.74 |
| CDX80299 | Canola | cytosol | 69.91 | 58.53 |
| CDX96994 | Canola | cytosol | 60.19 | 58.3 |
| CDX86332 | Canola | cytosol | 60.19 | 58.3 |
| CDY52622 | Canola | cytosol | 59.72 | 58.11 |
| CDY50568 | Canola | cytosol | 59.72 | 58.11 |
| CDX69843 | Canola | cytosol | 59.72 | 57.85 |
| CDY08447 | Canola | cytosol | 59.26 | 57.66 |
| CDY42133 | Canola | cytosol | 59.26 | 57.66 |
| CDX86101 | Canola | cytosol | 68.06 | 57.42 |
| CDY69836 | Canola | cytosol | 57.87 | 55.8 |
| CDY18682 | Canola | cytosol | 56.94 | 54.67 |
| CDX81274 | Canola | cytosol | 56.48 | 53.74 |
| CDX99094 | Canola | cytosol | 68.06 | 51.22 |
| CDX90017 | Canola | cytosol | 50.93 | 46.41 |
| CDY15192 | Canola | cytosol | 50.93 | 46.41 |
| CDX69367 | Canola | cytosol | 37.04 | 43.48 |
| CDX69369 | Canola | cytosol | 58.33 | 30.88 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078HE97 | UniProt:A0A078HE97 | EnsemblPlants:CDY35128 | ProteinID:CDY35128 |
| ProteinID:CDY35128.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00058012001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF592 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EEC27C |
Description
BnaA06g11380DBnaA06g11380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE97]
Coordinates
chrLK032346:-:349948..351446
Molecular Weight (calculated)
23994.4 Da
IEP (calculated)
5.183
GRAVY (calculated)
-0.335
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLTVEGK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGDDGN GSVPKGEKIE
201: VKNDVSALKK LGCCSN
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGDDGN GSVPKGEKIE
201: VKNDVSALKK LGCCSN
001: MAGYRVEDDY DYLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLKVDGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL CFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN ASVPKGEKIE
201: VKNDVSALKK LGCCSN
Arabidopsis Description
RABA1BRABA1b [Source:UniProtKB/TrEMBL;Acc:A0A178WJV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.