Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018190.1-P | Field mustard | cytosol | 75.61 | 100.0 |
| AT3G46830.1 | Thale cress | cytosol | 72.82 | 96.31 |
| CDX86101 | Canola | cytosol | 85.37 | 95.7 |
| CDY33014 | Canola | cytosol | 70.38 | 93.09 |
| CDY32661 | Canola | cytosol | 68.64 | 90.78 |
| CDY02867 | Canola | cytosol | 68.29 | 90.32 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 67.25 | 89.35 |
| PGSC0003DMT400053686 | Potato | cytosol | 67.25 | 89.35 |
| KRH29738 | Soybean | endoplasmic reticulum | 66.55 | 88.43 |
| CDY06703 | Canola | cytosol | 66.55 | 88.43 |
| CDY09919 | Canola | cytosol | 65.85 | 88.32 |
| CDY06256 | Canola | cytosol | 65.85 | 88.32 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 66.2 | 87.96 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 66.2 | 87.56 |
| CDY71720 | Canola | cytosol | 66.2 | 87.56 |
| Solyc06g076450.2.1 | Tomato | plastid | 65.51 | 87.44 |
| PGSC0003DMT400078200 | Potato | cytosol | 65.51 | 87.44 |
| CDX80299 | Canola | cytosol | 73.52 | 81.78 |
| CDY50888 | Canola | cytosol | 55.75 | 73.73 |
| CDX93495 | Canola | cytosol | 55.4 | 73.27 |
| CDY35128 | Canola | cytosol | 51.22 | 68.06 |
| CDY40023 | Canola | cytosol | 50.87 | 67.59 |
| CDX99430 | Canola | cytosol | 49.83 | 66.82 |
| CDX82451 | Canola | cytosol | 50.52 | 66.51 |
| CDY64916 | Canola | cytosol | 49.83 | 66.51 |
| CDY62557 | Canola | cytosol | 49.83 | 66.51 |
| CDX96799 | Canola | cytosol | 49.83 | 66.2 |
| CDX75804 | Canola | cytosol | 49.83 | 65.6 |
| CDX87774 | Canola | cytosol | 49.13 | 65.28 |
| CDY20100 | Canola | cytosol | 49.48 | 65.14 |
| CDX90160 | Canola | cytosol | 48.78 | 65.12 |
| CDY35757 | Canola | cytosol | 49.13 | 64.68 |
| CDY15659 | Canola | cytosol | 49.13 | 64.68 |
| CDX94631 | Canola | cytosol | 48.78 | 64.22 |
| CDY30818 | Canola | cytosol | 48.43 | 63.76 |
| CDY34094 | Canola | cytosol | 48.43 | 63.76 |
| CDY01540 | Canola | cytosol | 48.08 | 63.59 |
| CDY55638 | Canola | cytosol | 48.08 | 63.59 |
| CDX79548 | Canola | cytosol | 43.55 | 63.45 |
| CDY09976 | Canola | cytosol | 49.13 | 63.23 |
| CDY06210 | Canola | cytosol | 49.13 | 63.23 |
| CDX76522 | Canola | cytosol | 47.74 | 63.13 |
| CDX73833 | Canola | cytosol | 45.64 | 59.28 |
| CDY00758 | Canola | cytosol | 45.64 | 59.28 |
| CDY54519 | Canola | cytosol | 45.99 | 59.19 |
| CDX86332 | Canola | cytosol | 45.64 | 58.74 |
| CDY52622 | Canola | cytosol | 45.3 | 58.56 |
| CDY50568 | Canola | cytosol | 45.3 | 58.56 |
| CDY42133 | Canola | cytosol | 45.3 | 58.56 |
| CDY08447 | Canola | cytosol | 45.3 | 58.56 |
| CDY60884 | Canola | cytosol | 45.3 | 58.3 |
| CDX96994 | Canola | cytosol | 44.95 | 57.85 |
| CDX69843 | Canola | cytosol | 44.95 | 57.85 |
| CDY18682 | Canola | cytosol | 44.95 | 57.33 |
| CDY69836 | Canola | cytosol | 44.25 | 56.7 |
| CDX81274 | Canola | cytosol | 44.6 | 56.39 |
| CDX81790 | Canola | plastid | 51.22 | 55.06 |
| CDX69367 | Canola | cytosol | 30.31 | 47.28 |
| CDX90017 | Canola | cytosol | 39.02 | 47.26 |
| CDY15192 | Canola | cytosol | 39.02 | 47.26 |
| CDX69369 | Canola | cytosol | 43.55 | 30.64 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078EE59 | EnsemblPlants:CDX99094 | ProteinID:CDX99094 | ProteinID:CDX99094.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00107239001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EF159D |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g17850D
Coordinates
chrLK031908:+:306353..308565
Molecular Weight (calculated)
32014.2 Da
IEP (calculated)
9.741
GRAVY (calculated)
-0.435
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIDSKNKKS VHYYLPTPQK TNHDLVQFFF KKKKKKQKLK RNSSSSYLSD LIPPPFFVRK VGLIAKSGKE MANRVDQEYD YLFKIVLIGD SGVGKSNILS
101: RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF DNALRWLREL RDHADSNIVI MMAGNKSDLN
201: HLRSVAEEDG HNLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT INVDDTSGGV KRGCCST
101: RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF DNALRWLREL RDHADSNIVI MMAGNKSDLN
201: HLRSVAEEDG HNLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT INVDDTSGGV KRGCCST
001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
Arabidopsis Description
RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.