Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010860.1-P | Field mustard | cytosol | 98.62 | 100.0 |
| CDX90160 | Canola | cytosol | 98.62 | 100.0 |
| CDX94631 | Canola | cytosol | 99.08 | 99.08 |
| CDY15659 | Canola | cytosol | 98.62 | 98.62 |
| CDY30818 | Canola | cytosol | 98.17 | 98.17 |
| CDY34094 | Canola | cytosol | 98.17 | 98.17 |
| AT1G28550.1 | Thale cress | cytosol | 96.79 | 96.79 |
| CDX79548 | Canola | cytosol | 82.11 | 90.86 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 89.45 | 89.86 |
| KRH50137 | Soybean | cytosol, mitochondrion | 88.07 | 88.48 |
| TraesCS5A01G184100.1 | Wheat | golgi, plastid | 87.16 | 87.96 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 87.16 | 87.96 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 87.16 | 87.56 |
| Os09t0327100-01 | Rice | plasma membrane | 86.7 | 87.5 |
| OQU89311 | Sorghum | cytosol | 86.7 | 87.5 |
| TraesCS5D01G188900.1 | Wheat | cytosol | 86.24 | 87.04 |
| TraesCS5B01G182200.1 | Wheat | cytosol | 86.24 | 87.04 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 86.24 | 86.64 |
| KRH30863 | Soybean | cytosol | 85.78 | 86.18 |
| TraesCS7B01G200600.1 | Wheat | cytosol | 84.86 | 85.65 |
| EES19950 | Sorghum | cytosol | 84.86 | 85.65 |
| Os05t0564400-02 | Rice | plasma membrane | 84.86 | 85.25 |
| TraesCS7D01G289000.1 | Wheat | cytosol | 84.4 | 85.19 |
| TraesCS7A01G285200.1 | Wheat | cytosol | 84.4 | 85.19 |
| PGSC0003DMT400058784 | Potato | cytosol | 83.94 | 85.12 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 83.94 | 84.72 |
| TraesCS1A01G398400.1 | Wheat | cytosol | 83.94 | 84.72 |
| TraesCS1D01G405900.1 | Wheat | cytosol | 83.49 | 84.26 |
| TraesCS1B01G426300.1 | Wheat | cytosol | 83.49 | 84.26 |
| Solyc10g008840.2.1 | Tomato | cytosol | 83.03 | 84.19 |
| PGSC0003DMT400033395 | Potato | cytosol | 83.03 | 83.8 |
| GSMUA_Achr3P15540_001 | Banana | cytosol | 82.57 | 83.33 |
| Solyc03g006270.2.1 | Tomato | cytosol | 82.57 | 83.33 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 82.57 | 83.33 |
| CDX75804 | Canola | cytosol | 83.03 | 83.03 |
| CDX82451 | Canola | cytosol | 83.03 | 83.03 |
| GSMUA_Achr4P02760_001 | Banana | cytosol | 71.56 | 82.11 |
| GSMUA_Achr5P09130_001 | Banana | cytosol | 81.65 | 82.03 |
| GSMUA_Achr1P11940_001 | Banana | cytosol | 81.19 | 81.94 |
| GSMUA_Achr8P27180_001 | Banana | cytosol | 80.73 | 81.48 |
| CDY20100 | Canola | cytosol | 81.19 | 81.19 |
| GSMUA_Achr1P04780_001 | Banana | cytosol | 72.94 | 79.5 |
| CDX76522 | Canola | cytosol | 77.52 | 77.88 |
| CDY55638 | Canola | cytosol | 77.52 | 77.88 |
| CDY01540 | Canola | cytosol | 77.52 | 77.88 |
| CDX99430 | Canola | cytosol | 76.15 | 77.57 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 77.52 | 77.52 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 77.52 | 77.52 |
| CDY62557 | Canola | cytosol | 76.15 | 77.21 |
| CDY64916 | Canola | cytosol | 75.69 | 76.74 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 66.06 | 75.0 |
| CDX87774 | Canola | cytosol | 72.48 | 73.15 |
| CDY35128 | Canola | cytosol | 72.02 | 72.69 |
| CDX96799 | Canola | cytosol | 71.56 | 72.22 |
| OQU87300 | Sorghum | cytosol | 72.48 | 72.15 |
| Zm00001d043935_P001 | Maize | cytosol | 72.48 | 71.82 |
| CDY40023 | Canola | cytosol | 71.1 | 71.76 |
| CDY60884 | Canola | cytosol | 72.48 | 70.85 |
| CDY50888 | Canola | cytosol | 66.97 | 67.28 |
| CDY33014 | Canola | cytosol | 66.97 | 67.28 |
| CDY06210 | Canola | cytosol | 68.81 | 67.26 |
| CDY09976 | Canola | cytosol | 68.81 | 67.26 |
| CDX93495 | Canola | cytosol | 66.51 | 66.82 |
| CDY02867 | Canola | cytosol | 65.14 | 65.44 |
| CDY32661 | Canola | cytosol | 65.14 | 65.44 |
| CDY06256 | Canola | cytosol | 63.3 | 64.49 |
| CDY09919 | Canola | cytosol | 63.3 | 64.49 |
| CDY06703 | Canola | cytosol | 63.3 | 63.89 |
| CDY71720 | Canola | cytosol | 62.39 | 62.67 |
| CDX73833 | Canola | cytosol | 61.01 | 60.18 |
| CDY00758 | Canola | cytosol | 61.01 | 60.18 |
| CDY50568 | Canola | cytosol | 60.55 | 59.46 |
| CDY52622 | Canola | cytosol | 60.55 | 59.46 |
| CDX69843 | Canola | cytosol | 60.55 | 59.19 |
| CDX86332 | Canola | cytosol | 60.55 | 59.19 |
| CDY08447 | Canola | cytosol | 60.09 | 59.01 |
| CDY42133 | Canola | cytosol | 60.09 | 59.01 |
| CDX96994 | Canola | cytosol | 60.09 | 58.74 |
| CDY54519 | Canola | cytosol | 60.09 | 58.74 |
| CDX81790 | Canola | plastid | 71.56 | 58.43 |
| CDX80299 | Canola | cytosol | 66.97 | 56.59 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 65.14 | 56.13 |
| CDY69836 | Canola | cytosol | 57.34 | 55.8 |
| CDY18682 | Canola | cytosol | 57.34 | 55.56 |
| CDX86101 | Canola | cytosol | 64.68 | 55.08 |
| CDX81274 | Canola | cytosol | 57.34 | 55.07 |
| CDX90017 | Canola | cytosol | 53.67 | 49.37 |
| CDY15192 | Canola | cytosol | 53.67 | 49.37 |
| CDX99094 | Canola | cytosol | 64.68 | 49.13 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 77.52 | 48.84 |
| CDX69367 | Canola | cytosol | 38.99 | 46.2 |
| CDX69369 | Canola | cytosol | 57.34 | 30.64 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078HD48 | UniProt:A0A078HD48 | EnsemblPlants:CDY35757 | ProteinID:CDY35757 |
| ProteinID:CDY35757.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00059203001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF649 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EB0E3B |
Description
BnaC03g58780DBnaC03g58780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD48]
Coordinates
chrLK032359:-:369020..369860
Molecular Weight (calculated)
24220.5 Da
IEP (calculated)
5.167
GRAVY (calculated)
-0.329
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSN DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTED AKGFAERENT FFMETSALEA LNVENAFTEV LTEIYRVVSK KALEAGDDPT TALPKGQTIN
201: VGGRDDISAV KKPGCCSA
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTED AKGFAERENT FFMETSALEA LNVENAFTEV LTEIYRVVSK KALEAGDDPT TALPKGQTIN
201: VGGRDDISAV KKPGCCSA
001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
Arabidopsis Description
RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.