Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06256 | Canola | cytosol | 100.0 | 100.0 |
| CDY71720 | Canola | cytosol | 97.2 | 95.85 |
| AT1G07410.1 | Thale cress | cytosol | 95.79 | 95.79 |
| CDY06703 | Canola | cytosol | 95.79 | 94.91 |
| CDY33014 | Canola | cytosol | 86.45 | 85.25 |
| KRH29738 | Soybean | endoplasmic reticulum | 85.98 | 85.19 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 85.98 | 85.19 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 85.51 | 84.72 |
| PGSC0003DMT400053686 | Potato | cytosol | 85.51 | 84.72 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 85.51 | 84.33 |
| CDY32661 | Canola | cytosol | 85.51 | 84.33 |
| CDY02867 | Canola | cytosol | 85.51 | 84.33 |
| Solyc06g076450.2.1 | Tomato | plastid | 84.11 | 83.72 |
| PGSC0003DMT400078200 | Potato | cytosol | 84.11 | 83.72 |
| Bra031573.1-P | Field mustard | cytosol | 98.13 | 82.03 |
| CDY50888 | Canola | cytosol | 76.64 | 75.58 |
| CDX93495 | Canola | cytosol | 76.17 | 75.12 |
| CDX86101 | Canola | cytosol | 88.32 | 73.83 |
| CDX80299 | Canola | cytosol | 86.92 | 72.09 |
| CDY35128 | Canola | cytosol | 68.69 | 68.06 |
| CDX99430 | Canola | cytosol | 67.76 | 67.76 |
| CDY40023 | Canola | cytosol | 67.76 | 67.13 |
| CDY62557 | Canola | cytosol | 67.29 | 66.98 |
| CDY64916 | Canola | cytosol | 67.29 | 66.98 |
| CDX96799 | Canola | cytosol | 67.29 | 66.67 |
| CDX82451 | Canola | cytosol | 67.29 | 66.06 |
| CDX99094 | Canola | cytosol | 88.32 | 65.85 |
| CDY20100 | Canola | cytosol | 66.82 | 65.6 |
| CDX87774 | Canola | cytosol | 65.89 | 65.28 |
| CDX75804 | Canola | cytosol | 66.36 | 65.14 |
| CDX90160 | Canola | cytosol | 64.49 | 64.19 |
| CDY15659 | Canola | cytosol | 64.49 | 63.3 |
| CDY35757 | Canola | cytosol | 64.49 | 63.3 |
| CDX94631 | Canola | cytosol | 64.02 | 62.84 |
| CDY01540 | Canola | cytosol | 63.55 | 62.67 |
| CDX76522 | Canola | cytosol | 63.55 | 62.67 |
| CDY55638 | Canola | cytosol | 63.55 | 62.67 |
| CDY30818 | Canola | cytosol | 63.55 | 62.39 |
| CDY34094 | Canola | cytosol | 63.55 | 62.39 |
| CDX79548 | Canola | cytosol | 57.01 | 61.93 |
| CDY06210 | Canola | cytosol | 64.02 | 61.44 |
| CDY09976 | Canola | cytosol | 64.02 | 61.44 |
| CDX73833 | Canola | cytosol | 61.22 | 59.28 |
| CDY00758 | Canola | cytosol | 61.22 | 59.28 |
| CDY50568 | Canola | cytosol | 61.22 | 59.01 |
| CDY52622 | Canola | cytosol | 61.22 | 59.01 |
| CDY42133 | Canola | cytosol | 60.75 | 58.56 |
| CDY08447 | Canola | cytosol | 60.75 | 58.56 |
| CDX86332 | Canola | cytosol | 60.75 | 58.3 |
| CDX69843 | Canola | cytosol | 60.28 | 57.85 |
| CDY54519 | Canola | cytosol | 60.28 | 57.85 |
| CDX96994 | Canola | cytosol | 60.28 | 57.85 |
| CDY18682 | Canola | cytosol | 59.81 | 56.89 |
| CDX81274 | Canola | cytosol | 60.28 | 56.83 |
| CDY60884 | Canola | cytosol | 58.88 | 56.5 |
| CDY69836 | Canola | cytosol | 58.88 | 56.25 |
| CDX81790 | Canola | plastid | 67.76 | 54.31 |
| CDX90017 | Canola | cytosol | 52.34 | 47.26 |
| CDY15192 | Canola | cytosol | 52.34 | 47.26 |
| CDX69367 | Canola | cytosol | 39.25 | 45.65 |
| CDX69369 | Canola | cytosol | 57.94 | 30.39 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078EYN0 | UniProt:A0A078EYN0 | EnsemblPlants:CDY09919 | ProteinID:CDY09919 |
| ProteinID:CDY09919.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00031686001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0004EC77AB | : | : | : | : | : |
Description
BnaC08g45320DBnaA09g49470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078EYN0]
Coordinates
chrLK032000:-:86249..87100
Molecular Weight (calculated)
23675.0 Da
IEP (calculated)
6.135
GRAVY (calculated)
-0.293
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MANRLDNEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLHEL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAS NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SESSVDNKKG CCSN
101: ENVLRWLHEL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAS NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SESSVDNKKG CCSN
001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
Arabidopsis Description
RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.