CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032914.1-P	Field mustard	cytosol	100.0	100.0
CDY30818	Canola	cytosol	100.0	100.0
CDY35757	Canola	cytosol	98.17	98.17
CDX94631	Canola	cytosol	98.17	98.17
CDX90160	Canola	cytosol	96.79	98.14
AT1G28550.1	Thale cress	cytosol	97.71	97.71
CDY15659	Canola	cytosol	97.71	97.71
CDX79548	Canola	cytosol	83.49	92.39
KRH20359	Soybean	cytosol, endoplasmic reticulum	89.91	90.32
KRH50137	Soybean	cytosol, mitochondrion	88.53	88.94
TraesCS5A01G184100.1	Wheat	golgi, plastid	88.07	88.89
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	88.07	88.89
VIT_10s0003g00550.t01	Wine grape	cytosol	88.07	88.48
TraesCS5D01G188900.1	Wheat	cytosol	87.16	87.96
TraesCS5B01G182200.1	Wheat	cytosol	87.16	87.96
Os09t0327100-01	Rice	plasma membrane	86.7	87.5
OQU89311	Sorghum	cytosol	86.7	87.5
KRH30863	Soybean	cytosol	86.7	87.1
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	86.7	87.1
EES19950	Sorghum	cytosol	85.78	86.57
TraesCS7B01G200600.1	Wheat	cytosol	85.78	86.57
Os05t0564400-02	Rice	plasma membrane	85.78	86.18
TraesCS7D01G289000.1	Wheat	cytosol	85.32	86.11
TraesCS7A01G285200.1	Wheat	cytosol	85.32	86.11
TraesCS1A01G398400.1	Wheat	cytosol	84.86	85.65
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	84.86	85.65
TraesCS1D01G405900.1	Wheat	cytosol	84.4	85.19
TraesCS1B01G426300.1	Wheat	cytosol	84.4	85.19
PGSC0003DMT400058784	Potato	cytosol	83.94	85.12
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	83.49	84.26
GSMUA_Achr3P15540_001	Banana	cytosol	83.49	84.26
Solyc10g008840.2.1	Tomato	cytosol	83.03	84.19
CDX82451	Canola	cytosol	83.94	83.94
CDX75804	Canola	cytosol	83.94	83.94
PGSC0003DMT400033395	Potato	cytosol	83.03	83.8
Solyc03g006270.2.1	Tomato	cytosol	82.57	83.33
GSMUA_Achr4P02760_001	Banana	cytosol	72.48	83.16
GSMUA_Achr5P09130_001	Banana	cytosol	82.11	82.49
GSMUA_Achr1P11940_001	Banana	cytosol	81.65	82.41
GSMUA_Achr8P27180_001	Banana	cytosol	81.65	82.41
CDY20100	Canola	cytosol	81.65	81.65
GSMUA_Achr1P04780_001	Banana	cytosol	73.39	80.0
CDX76522	Canola	cytosol	77.98	78.34
CDY01540	Canola	cytosol	77.98	78.34
CDY55638	Canola	cytosol	77.98	78.34
CDX99430	Canola	cytosol	76.61	78.04
CDY62557	Canola	cytosol	76.61	77.67
TraesCS3A01G247000.1	Wheat	cytosol	77.52	77.52
TraesCS3D01G244500.1	Wheat	cytosol	77.52	77.52
CDY64916	Canola	cytosol	76.15	77.21
GSMUA_Achr7P14790_001	Banana	cytosol	66.97	76.04
CDX87774	Canola	cytosol	72.94	73.61
CDX96799	Canola	cytosol	72.48	73.15
CDY35128	Canola	cytosol	72.48	73.15
OQU87300	Sorghum	cytosol	72.94	72.6
Zm00001d043935_P001	Maize	cytosol	72.94	72.27
CDY40023	Canola	cytosol	71.56	72.22
CDY60884	Canola	cytosol	72.48	70.85
CDY06210	Canola	cytosol	69.72	68.16
CDY09976	Canola	cytosol	69.72	68.16
CDY50888	Canola	cytosol	66.06	66.36
CDY33014	Canola	cytosol	66.06	66.36
CDX93495	Canola	cytosol	65.6	65.9
CDY02867	Canola	cytosol	64.22	64.52
CDY32661	Canola	cytosol	64.22	64.52
CDY06256	Canola	cytosol	62.39	63.55
CDY09919	Canola	cytosol	62.39	63.55
CDY06703	Canola	cytosol	62.39	62.96
CDY71720	Canola	cytosol	61.47	61.75
CDX73833	Canola	cytosol	60.55	59.73
CDY00758	Canola	cytosol	60.55	59.73
CDX81790	Canola	plastid	72.48	59.18
CDY50568	Canola	cytosol	60.09	59.01
CDY52622	Canola	cytosol	60.09	59.01
CDX69843	Canola	cytosol	60.09	58.74
CDX86332	Canola	cytosol	60.09	58.74
CDY08447	Canola	cytosol	59.63	58.56
CDY42133	Canola	cytosol	59.63	58.56
CDX96994	Canola	cytosol	59.63	58.3
CDY54519	Canola	cytosol	59.63	58.3
GSMUA_Achr7P10970_001	Banana	cytosol	65.6	56.52
CDX80299	Canola	cytosol	66.06	55.81
CDY69836	Canola	cytosol	56.88	55.36
CDY18682	Canola	cytosol	56.88	55.11
CDX81274	Canola	cytosol	56.88	54.63
CDX86101	Canola	cytosol	63.76	54.3
CDX90017	Canola	cytosol	53.21	48.95
CDY15192	Canola	cytosol	53.21	48.95
TraesCS3B01G272300.1	Wheat	cytosol	77.52	48.84
CDX99094	Canola	cytosol	63.76	48.43
CDX69367	Canola	cytosol	38.53	45.65
CDX69369	Canola	cytosol	56.88	30.39

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078H1X1	UniProt:A0A078H1X1	ProteinID:CDY30818.1	EnsemblPlants:CDY34094
ProteinID:CDY34094	ProteinID:CDY34094.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00056020001	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI000254249B	:	:	:	:	:

Description

BnaA09g27200DBnaA09g27200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1X1]

Coordinates

chrLK032328:+:256231..257100

Molecular Weight (calculated)

24256.6 Da

IEP (calculated)

6.140

GRAVY (calculated)

-0.319

Length

218 amino acids

Sequence
(BLAST)

001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIKCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTED AKAFAERENT FFMETSALEA LNVENAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQTIN
201: VGGRDDISAV KKPGCCSA

Best Arabidopsis Sequence Match ( AT1G28550.1 )
(BLAST)

001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA

Arabidopsis Description

RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.