Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35128 | Canola | cytosol | 97.69 | 97.69 |
| Bra026016.1-P | Field mustard | cytosol | 97.22 | 97.22 |
| AT1G16920.1 | Thale cress | cytosol | 96.3 | 96.3 |
| CDX96799 | Canola | cytosol | 93.98 | 93.98 |
| KRH27364 | Soybean | endoplasmic reticulum | 87.5 | 87.1 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 87.04 | 86.64 |
| GSMUA_Achr4P02540_001 | Banana | cytosol | 74.07 | 83.33 |
| GSMUA_Achr9P05610_001 | Banana | cytosol | 82.87 | 83.26 |
| GSMUA_Achr3P15680_001 | Banana | plasma membrane | 83.33 | 82.95 |
| CDX99430 | Canola | cytosol | 81.02 | 81.78 |
| GSMUA_Achr8P27780_001 | Banana | cytosol | 68.06 | 81.67 |
| CDY62557 | Canola | cytosol | 80.56 | 80.93 |
| CDY64916 | Canola | cytosol | 80.56 | 80.93 |
| EES19812 | Sorghum | cytosol | 81.48 | 80.0 |
| TraesCS3D01G289400.1 | Wheat | cytosol | 81.48 | 79.64 |
| GSMUA_Achr6P31790_001 | Banana | cytosol | 61.11 | 79.52 |
| TraesCS3A01G289600.1 | Wheat | cytosol | 81.02 | 79.19 |
| TraesCS3B01G324300.1 | Wheat | cytosol, golgi | 81.02 | 79.19 |
| CDX87774 | Canola | cytosol | 79.17 | 79.17 |
| CDX81790 | Canola | plastid | 95.37 | 77.15 |
| VIT_19s0014g01160.t01 | Wine grape | extracellular | 87.5 | 75.0 |
| CDX75804 | Canola | cytosol | 74.54 | 73.85 |
| CDX82451 | Canola | cytosol | 74.54 | 73.85 |
| CDY06210 | Canola | cytosol | 75.93 | 73.54 |
| CDX79548 | Canola | cytosol | 66.67 | 73.1 |
| CDY09976 | Canola | cytosol | 75.46 | 73.09 |
| CDX90160 | Canola | cytosol | 71.76 | 72.09 |
| CDY20100 | Canola | cytosol | 72.69 | 72.02 |
| CDY34094 | Canola | cytosol | 72.22 | 71.56 |
| CDY30818 | Canola | cytosol | 72.22 | 71.56 |
| CDY35757 | Canola | cytosol | 71.76 | 71.1 |
| CDY15659 | Canola | cytosol | 71.3 | 70.64 |
| CDX94631 | Canola | cytosol | 71.3 | 70.64 |
| CDX76522 | Canola | cytosol | 69.44 | 69.12 |
| CDY50888 | Canola | cytosol | 68.98 | 68.66 |
| CDY32661 | Canola | cytosol | 68.98 | 68.66 |
| CDY33014 | Canola | cytosol | 68.98 | 68.66 |
| CDY02867 | Canola | cytosol | 68.98 | 68.66 |
| CDY01540 | Canola | cytosol | 68.52 | 68.2 |
| CDY55638 | Canola | cytosol | 68.52 | 68.2 |
| CDY09919 | Canola | cytosol | 67.13 | 67.76 |
| CDY06256 | Canola | cytosol | 67.13 | 67.76 |
| CDX93495 | Canola | cytosol | 68.06 | 67.74 |
| CDY06703 | Canola | cytosol | 67.13 | 67.13 |
| CDY71720 | Canola | cytosol | 66.2 | 65.9 |
| CDY60884 | Canola | cytosol | 63.89 | 61.88 |
| HORVU3Hr1G071740.1 | Barley | plastid | 81.48 | 61.54 |
| CDX80299 | Canola | cytosol | 69.44 | 58.14 |
| CDY54519 | Canola | cytosol | 59.72 | 57.85 |
| CDX86332 | Canola | cytosol | 59.26 | 57.4 |
| CDX96994 | Canola | cytosol | 59.26 | 57.4 |
| CDX86101 | Canola | cytosol | 67.59 | 57.03 |
| CDX73833 | Canola | cytosol | 58.33 | 57.01 |
| CDY00758 | Canola | cytosol | 58.33 | 57.01 |
| CDX69843 | Canola | cytosol | 58.8 | 56.95 |
| CDY52622 | Canola | cytosol | 57.87 | 56.31 |
| CDY50568 | Canola | cytosol | 57.87 | 56.31 |
| CDY42133 | Canola | cytosol | 57.41 | 55.86 |
| CDY08447 | Canola | cytosol | 57.41 | 55.86 |
| CDY69836 | Canola | cytosol | 56.94 | 54.91 |
| CDY18682 | Canola | cytosol | 56.48 | 54.22 |
| CDX81274 | Canola | cytosol | 56.02 | 53.3 |
| CDX99094 | Canola | cytosol | 67.59 | 50.87 |
| CDX90017 | Canola | cytosol | 50.0 | 45.57 |
| CDY15192 | Canola | cytosol | 50.0 | 45.57 |
| CDX69367 | Canola | cytosol | 37.5 | 44.02 |
| CDX69369 | Canola | cytosol | 57.41 | 30.39 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078HTI1 | UniProt:A0A078HTI1 | EnsemblPlants:CDY40023 | ProteinID:CDY40023 |
| ProteinID:CDY40023.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00068925001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF592 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE0E5F |
Description
BnaC05g12920DBnaC05g12920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTI1]
Coordinates
chrLK032462:+:150915..152289
Molecular Weight (calculated)
24008.4 Da
IEP (calculated)
5.188
GRAVY (calculated)
-0.335
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYRVEDDY DCLFKVVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATRTLTVEGK VIKSQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRRAT
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL YFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN GAVPKGEKIE
201: VKNDVSALKK LGCCSN
101: FENVDRWLKE LKNHTDPNIV VMLVGNKSDL RHLLAVPTED GKSYAEQESL YFMETSALEA TNVEDAFAEV LTQIYRITSK KQVEAGEDGN GAVPKGEKIE
201: VKNDVSALKK LGCCSN
001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN
Arabidopsis Description
RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.