Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G45750.1 | Thale cress | cytosol | 96.76 | 96.76 |
| CDX99430 | Canola | cytosol | 88.89 | 89.72 |
| CDY64916 | Canola | cytosol | 87.96 | 88.37 |
| CDY62557 | Canola | cytosol | 87.96 | 88.37 |
| Solyc02g072180.2.1 | Tomato | cytosol | 86.11 | 85.71 |
| PGSC0003DMT400073077 | Potato | cytosol | 86.11 | 85.71 |
| CDX96799 | Canola | cytosol | 79.63 | 79.63 |
| CDY35128 | Canola | cytosol | 79.63 | 79.63 |
| CDY40023 | Canola | cytosol | 79.17 | 79.17 |
| CDX79548 | Canola | cytosol | 67.59 | 74.11 |
| CDY06210 | Canola | cytosol | 76.39 | 73.99 |
| CDY09976 | Canola | cytosol | 75.93 | 73.54 |
| CDX90160 | Canola | cytosol | 73.15 | 73.49 |
| CDX76522 | Canola | cytosol | 73.61 | 73.27 |
| CDY30818 | Canola | cytosol | 73.61 | 72.94 |
| CDY34094 | Canola | cytosol | 73.61 | 72.94 |
| CDX82451 | Canola | cytosol | 73.61 | 72.94 |
| CDY55638 | Canola | cytosol | 73.15 | 72.81 |
| CDY01540 | Canola | cytosol | 73.15 | 72.81 |
| CDY35757 | Canola | cytosol | 73.15 | 72.48 |
| CDY20100 | Canola | cytosol | 73.15 | 72.48 |
| CDX75804 | Canola | cytosol | 72.69 | 72.02 |
| CDX94631 | Canola | cytosol | 72.69 | 72.02 |
| CDY15659 | Canola | cytosol | 72.69 | 72.02 |
| CDY60884 | Canola | cytosol | 72.22 | 69.96 |
| CDY09919 | Canola | cytosol | 65.28 | 65.89 |
| CDY06256 | Canola | cytosol | 65.28 | 65.89 |
| CDY06703 | Canola | cytosol | 65.28 | 65.28 |
| CDX81790 | Canola | plastid | 80.56 | 65.17 |
| CDY50888 | Canola | cytosol | 64.81 | 64.52 |
| CDY02867 | Canola | cytosol | 64.35 | 64.06 |
| CDY71720 | Canola | cytosol | 64.35 | 64.06 |
| CDY32661 | Canola | cytosol | 64.35 | 64.06 |
| CDX93495 | Canola | cytosol | 64.35 | 64.06 |
| CDY33014 | Canola | cytosol | 63.89 | 63.59 |
| CDY54519 | Canola | cytosol | 60.65 | 58.74 |
| CDX86332 | Canola | cytosol | 60.19 | 58.3 |
| CDX96994 | Canola | cytosol | 60.19 | 58.3 |
| CDX69843 | Canola | cytosol | 59.72 | 57.85 |
| CDY18682 | Canola | cytosol | 58.33 | 56.0 |
| CDY00758 | Canola | cytosol | 56.94 | 55.66 |
| CDX73833 | Canola | cytosol | 56.94 | 55.66 |
| CDX86101 | Canola | cytosol | 65.28 | 55.08 |
| CDX81274 | Canola | cytosol | 57.87 | 55.07 |
| CDY50568 | Canola | cytosol | 56.48 | 54.95 |
| CDY52622 | Canola | cytosol | 56.48 | 54.95 |
| CDY69836 | Canola | cytosol | 56.94 | 54.91 |
| CDY42133 | Canola | cytosol | 56.02 | 54.5 |
| CDY08447 | Canola | cytosol | 56.02 | 54.5 |
| CDX80299 | Canola | cytosol | 64.35 | 53.88 |
| CDX99094 | Canola | cytosol | 65.28 | 49.13 |
| CDY15192 | Canola | cytosol | 50.93 | 46.41 |
| CDX90017 | Canola | cytosol | 50.93 | 46.41 |
| CDX69367 | Canola | cytosol | 37.5 | 44.02 |
| CDX69369 | Canola | cytosol | 56.48 | 29.9 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078DH63 | UniProt:A0A078DH63 | EnsemblPlants:CDX87774 | ProteinID:CDX87774 |
| ProteinID:CDX87774.1 | ProteinID:CDY26366.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0042546 | EnsemblPlantsGene:GSBRNA2T00146855001 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 | SMART:SM00173 | SMART:SM00174 |
| SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0001EEB310 | : | : | : | : | : |
Description
BnaC02g31750DBnaA02g24040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078DH63]
Coordinates
chrLK031851:-:1249063..1251115
Molecular Weight (calculated)
23825.1 Da
IEP (calculated)
5.378
GRAVY (calculated)
-0.275
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGYKADDEY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSLNVDDK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTDD AKSFAEKESL YFMETSALDS TNVENAFAEV LTQIHCIVSR KAMEAASESA NVPSKGDKID
201: LGKDVSAVKK GGCCSN
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTDD AKSFAEKESL YFMETSALDS TNVENAFAEV LTQIHCIVSR KAMEAASESA NVPSKGDKID
201: LGKDVSAVKK GGCCSN
001: MAGYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSLNVDDK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAEKESL YFMETSALEA TNVENAFAEV LTQIHHIVSK KAMEAASESA NVPSKGDKID
201: IGKDVSAVKK GGCCSN
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAEKESL YFMETSALEA TNVENAFAEV LTQIHHIVSK KAMEAASESA NVPSKGDKID
201: IGKDVSAVKK GGCCSN
Arabidopsis Description
RABA1CRABA1c [Source:UniProtKB/TrEMBL;Acc:A0A178UDB2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.