Factsheet for AT5G45750.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87774	Canola	cytosol	96.76	96.76
AT4G18800.1	Thale cress	cytosol	90.28	91.12
Solyc02g072180.2.1	Tomato	cytosol	87.5	87.1
PGSC0003DMT400073077	Potato	cytosol	87.5	87.1
AT1G16920.1	Thale cress	cytosol	81.94	81.94
AT5G60860.1	Thale cress	cytosol	79.17	78.8
AT1G06400.1	Thale cress	cytosol	77.31	77.31
AT3G15060.1	Thale cress	cytosol	76.85	76.5
AT1G28550.1	Thale cress	cytosol	75.0	74.31
AT4G18430.1	Thale cress	cytosol	74.54	74.19
AT2G33870.1	Thale cress	cytosol	74.07	73.39
AT1G07410.1	Thale cress	cytosol	68.98	69.63
AT3G46830.1	Thale cress	cytosol	67.59	67.28
AT1G09630.1	Thale cress	cytosol	67.13	66.82
AT5G59150.1	Thale cress	cytosol	66.2	65.9
AT5G47960.1	Thale cress	cytosol	60.65	58.74
AT4G39990.1	Thale cress	cytosol	59.72	57.59
AT3G12160.1	Thale cress	cytosol	58.8	57.21
AT5G65270.1	Thale cress	cytosol	59.72	57.08
AT1G01200.1	Thale cress	cytosol	53.7	48.95

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:834614	UniProt:A0A178UDB2	ProteinID:AED95292.1	EMBL:AF370219
ArrayExpress:AT5G45750	EnsemblPlantsGene:AT5G45750	RefSeq:AT5G45750	TAIR:AT5G45750	RefSeq:AT5G45750-TAIR-G	EnsemblPlants:AT5G45750.1
TAIR:AT5G45750.1	EMBL:AY059111	EMBL:AY084274	Symbol:AtRABA1c	ProteinID:BAB09217.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005768
GO:GO:0005773	GO:GO:0005829	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009987
GO:GO:0015031	GO:GO:0016020	GO:GO:0016787	GO:GO:0042546	RefSeq:NP_199387.1	ProteinID:OAO91639.1
InterPro:P-loop_NTPase	PFAM:PF00071	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0005052	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF592	UniProt:Q9FK68
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000009EB4D	SEG:seg	:	:

Description

RABA1CRABA1c [Source:UniProtKB/TrEMBL;Acc:A0A178UDB2]

Coordinates

chr5:+:18559060..18560945

Molecular Weight (calculated)

23871.1 Da

IEP (calculated)

5.684

GRAVY (calculated)

-0.287

Length

216 amino acids

Sequence
(BLAST)

001: MAGYRADDEY DYLFKVVLIG DSGVGKSNLL SRFTKNEFSL ESKSTIGVEF ATRSLNVDDK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVETWLKE LRNHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAEKESL YFMETSALEA TNVENAFAEV LTQIHHIVSK KAMEAASESA NVPSKGDKID
201: IGKDVSAVKK GGCCSN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.