Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018190.1-P | Field mustard | cytosol | 96.31 | 96.31 |
| AT5G59150.1 | Thale cress | cytosol | 92.63 | 92.63 |
| AT1G07410.1 | Thale cress | cytosol | 87.56 | 88.78 |
| KRH29738 | Soybean | endoplasmic reticulum | 88.02 | 88.43 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 88.02 | 88.43 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 87.56 | 87.96 |
| PGSC0003DMT400053686 | Potato | cytosol | 87.56 | 87.96 |
| VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 87.1 | 87.1 |
| Solyc06g076450.2.1 | Tomato | plastid | 85.25 | 86.05 |
| PGSC0003DMT400078200 | Potato | cytosol | 85.25 | 86.05 |
| CDX86101 | Canola | cytosol | 96.31 | 81.64 |
| AT1G09630.1 | Thale cress | cytosol | 75.12 | 75.12 |
| CDX99094 | Canola | cytosol | 96.31 | 72.82 |
| AT4G18800.1 | Thale cress | cytosol | 67.28 | 68.22 |
| AT1G16920.1 | Thale cress | cytosol | 67.28 | 67.59 |
| AT5G45750.1 | Thale cress | cytosol | 67.28 | 67.59 |
| AT5G60860.1 | Thale cress | cytosol | 67.28 | 67.28 |
| AT1G06400.1 | Thale cress | cytosol | 65.9 | 66.2 |
| AT3G15060.1 | Thale cress | cytosol | 65.44 | 65.44 |
| AT4G18430.1 | Thale cress | cytosol | 64.06 | 64.06 |
| AT2G33870.1 | Thale cress | cytosol | 63.13 | 62.84 |
| AT1G28550.1 | Thale cress | cytosol | 62.67 | 62.39 |
| AT5G47960.1 | Thale cress | cytosol | 61.29 | 59.64 |
| AT3G12160.1 | Thale cress | cytosol | 59.91 | 58.56 |
| AT5G65270.1 | Thale cress | cytosol | 59.91 | 57.52 |
| AT4G39990.1 | Thale cress | cytosol | 57.6 | 55.8 |
| AT1G01200.1 | Thale cress | cytosol | 53.92 | 49.37 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:823836 | UniProt:A0A178V892 | ProteinID:AEE78209.1 | ProteinID:ANM65760.1 |
| ArrayExpress:AT3G46830 | EnsemblPlantsGene:AT3G46830 | RefSeq:AT3G46830 | TAIR:AT3G46830 | RefSeq:AT3G46830-TAIR-G | EnsemblPlants:AT3G46830.1 |
| TAIR:AT3G46830.1 | Symbol:ATRAB11A | EMBL:AY065380 | EMBL:AY087450 | EMBL:AY096545 | ProteinID:CAB51182.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009504 | GO:GO:0009506 |
| GO:GO:0010008 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016787 | RefSeq:NP_001327707.1 | RefSeq:NP_190267.1 |
| ProteinID:OAP02409.1 | InterPro:P-loop_NTPase | PFAM:PF00071 | PO:PO:0000003 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 |
| PANTHER:PTHR24073:SF495 | UniProt:Q96283 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0000001435 |
| EMBL:Y08904 | SEG:seg | : | : | : | : |
Description
RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
Coordinates
chr3:-:17246228..17248823
Molecular Weight (calculated)
23850.1 Da
IEP (calculated)
6.133
GRAVY (calculated)
-0.279
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.